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SCNpilot_cont_500_bf_scaffold_4259_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1846..2466)

Top 3 Functional Annotations

Value Algorithm Source
protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3); K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 206.0
  • Bit_score: 350
  • Evalue 3.30e-94
  • rbh
Protocatechuate 3,4-dioxygenase, alpha chain n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LB13_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 206.0
  • Bit_score: 350
  • Evalue 1.00e-93
  • rbh
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KJF67236.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 206.0
  • Bit_score: 351
  • Evalue 8.50e-94

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGTACAGCCGCTCGGATATCTCAAGGAAAGCCCTTCGCAGACCGCCGGCCCTTATGTACATATCGGCTGCACACCGAATTTCGCCGGCATCCACGGCATTTTCGAGCAGGATCTCGGTGCCGGGCCGCTTTATGACGAAAAGCACCGCGGTGAGCGCATTGCCGTCAACGGAATGGTCATCGATGGCGGCGGCAACCCGCTGAAGGATGCGCTGGTGGAAATATGGCAAGCGGATGCGGACGGGCTGCACAACAGCCCGAGCGAGACGCGCGGAACCGCCGATCCGCATTTTCGCGGCTGGGGTCGCTCTCCGGGCGATATGGAGACCGGCGAGTTCCTGTTCGAAACCATCAAGCCCGGCCGCGTTCCCTTCCGCGATGGGCGGCTGATGGCGCCGCACATCACCTTCTGGATCGTGGCGCGCGGCATCAATCTCGGCCTGCACACCCGCATGTATTTCCCGGAGGAAGTCGAGGCCAATGCCGCCGATCCGGTGCTGCTGCGCATCGAGCACCGCAACCGTGTGCCGACGCTGATCGCCCGCAAGGAGGGCGAAGGCCTCTATCGTTTCGACATCCGCCTGCAAGGCGAGGGCGAAACCGTGTTCTTCGACATCTGA
PROTEIN sequence
Length: 207
MVQPLGYLKESPSQTAGPYVHIGCTPNFAGIHGIFEQDLGAGPLYDEKHRGERIAVNGMVIDGGGNPLKDALVEIWQADADGLHNSPSETRGTADPHFRGWGRSPGDMETGEFLFETIKPGRVPFRDGRLMAPHITFWIVARGINLGLHTRMYFPEEVEANAADPVLLRIEHRNRVPTLIARKEGEGLYRFDIRLQGEGETVFFDI*