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SCNpilot_cont_500_bf_scaffold_4259_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3203..3607)

Top 3 Functional Annotations

Value Algorithm Source
pcaC; 4-carboxymuconolactone decarboxylase (EC:4.1.1.44) similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 137.0
  • Bit_score: 205
  • Evalue 1.40e-50
4-carboxymuconolactone decarboxylase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K2N0_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 136.0
  • Bit_score: 205
  • Evalue 4.60e-50
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:GAK69776.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 131.0
  • Bit_score: 206
  • Evalue 2.20e-50

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GTGACAGACCGATTTTCGCAAGGGATGGCGACGCGCCGGGGCGTGCTGGGCGATGCGCATGTCGATCGCGCCACCGCGCAGGCAACCGCCTTCGACCAGCCCTTCCAGCAGATGATCACCGAAACCGCTTGGGGCACGGTCTGGTCCGGCGAGCAGTGGACGCGGCGCGAGCGCTCGATGGTGACCATCGCGCTGCTGGCAGCCATCGGCCAGGACGAGGAACTGGCCATGCACGTCCGCGCCACCTTCAATACCGGCGCCAGCCCCGAGGATATCCGCGAAGCGCTGATGCATGTCGCCATCTATGCCGGCGTGCCCGCCGCCAACCATGCCTTCAAGATCGCCAAGCAGACGCTGGCGGCCATGCAGGCGCCCGCCGATGCCGCCAAGGAGGAGAAAAAGTGA
PROTEIN sequence
Length: 135
VTDRFSQGMATRRGVLGDAHVDRATAQATAFDQPFQQMITETAWGTVWSGEQWTRRERSMVTIALLAAIGQDEELAMHVRATFNTGASPEDIREALMHVAIYAGVPAANHAFKIAKQTLAAMQAPADAAKEEKK*