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SCNpilot_cont_500_bf_scaffold_5300_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(9215..9748)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine-binding periplasmic protein 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWZ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 177.0
  • Bit_score: 361
  • Evalue 5.00e-97
  • rbh
Spermidine/putrescine-binding periplasmic protein 1 {ECO:0000313|EMBL:EYR79412.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 177.0
  • Bit_score: 361
  • Evalue 7.10e-97
putative spermidine/putrescine ABC transporter substrate-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 172.0
  • Bit_score: 124
  • Evalue 4.30e-26

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTCTTCTGGCGCGAAGGCAAGGACTACAATACGGGTGACGAGAAGCGCCTGAACGAAGCCAAGGATGTGCTGATTAAGGACCTCATCCCGCACCTCAAGGCCTTCGACGCCAACCCTGTGCAGGGACTGCTGAACGGCGACTACGTGCTTAGCCAAGGCTATCTCGGCAGCTCGCGCCATATTTTCGAGCAGGATCCCGACAGCTACACCTGGGTCTATCCGGAGCCGCAATGCGTGCTGTGGAGCGATCATTACGCGGTGCCGTCCGGGTCCAGGCACACAGACGCCGCCCATGCCTTCATCAACTATATGCTGGATCCAGATGTAGCCGCAGCCGAAGTGGCCCATATCGGATATGACACCGGCGTAAAGGGTGTCATCGAGAAGCTGCCTGATGACCTCGTCCGCAAGGACATGATCGTGTTTCCCGAGGGGGTCACCGACCGCCTTATCTACCAGAAGGTGGAAGGCTCCAATCCCACGCTGCGCATCCAGATCTTTAACGAATTGAAGGCGGCGGCGGCACGCAATTAA
PROTEIN sequence
Length: 178
VFWREGKDYNTGDEKRLNEAKDVLIKDLIPHLKAFDANPVQGLLNGDYVLSQGYLGSSRHIFEQDPDSYTWVYPEPQCVLWSDHYAVPSGSRHTDAAHAFINYMLDPDVAAAEVAHIGYDTGVKGVIEKLPDDLVRKDMIVFPEGVTDRLIYQKVEGSNPTLRIQIFNELKAAAARN*