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SCNpilot_cont_500_bf_scaffold_4712_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(1..255)

Top 3 Functional Annotations

Value Algorithm Source
Chemoreceptor McpA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHS7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 80.0
  • Bit_score: 90
  • Evalue 7.90e-16
Chemotaxis protein {ECO:0000313|EMBL:KEQ08443.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 79.0
  • Bit_score: 100
  • Evalue 1.40e-18
mcpV2; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 81.0
  • Bit_score: 80
  • Evalue 2.60e-13

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Taxonomy

Rhizobium sp. R1-200B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGCGCGACCAATCCTCCAAGACTGCCAAGCTGAACGACAGGCTCGAATTCGTCGGTCTCGACGCCGCGCAGAAGGCGGCGCTCTCCTGTCAGAGCGAAATCATCGGTGCGTCGCTCGATGCTGCGCTGGATGCCTTTTACGCCCGGGCGAAGACGCATCCGGAAACCGCCCGCTTCTTTTCCAGCCAGGCCCATATCGAACATGCCAAGCAGCGGCAGATCGCCCATTGGAAGACGATCTGCCGCTGCTTGGCA
PROTEIN sequence
Length: 85
MRDQSSKTAKLNDRLEFVGLDAAQKAALSCQSEIIGASLDAALDAFYARAKTHPETARFFSSQAHIEHAKQRQIAHWKTICRCLA