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SCNpilot_cont_500_bf_scaffold_5159_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1600..3222

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D8Q8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 483.0
  • Bit_score: 851
  • Evalue 6.40e-244
  • rbh
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:EYR81665.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 483.0
  • Bit_score: 851
  • Evalue 8.90e-244
ABC superfamily ATP binding cassette transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 489.0
  • Bit_score: 528
  • Evalue 3.00e-147
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1623
ATGAACCGGATATTCTTGATTTCGACGGCGCTGGCGGCGGGATTGCTGTTTGGCGCCGCCGCGCAGGCCAGCACCCTCAACATTCGCATCAACGCCGATATTCGCGGCGTCGAGGGGCTGAACCGCGACGCCAATACCGACACCGTGCTGCACCACATCTTCGAGACCCTGGTCGGGTTTCGCGACGACCTGACGATCGGCCCGGTGCTGGCCGAATCCTGGACGGTGTCCGACGACGGCAAGACCTACACCTTCACGCTGCGCGACGGCGCGACCTTCCACAATGGCGACCCCGTGACCTCGGCGGACGTCAAATGGAACTGGGATCGGCGTGTCGCCGCCGGCGCGGCCTGGTTCTGCAATGCGTTCTTCGATGGCTCACAGGGGCTGAAGGTCGAGGCAGTGGAAACGCCCGATCCGCGCACCGTCGTCTTCAAGATCAACGAGCCGAATGCGCTGTTCCTCGCCCAGCTTGCCAATATCCAGTGCAACGCCTGGATCGCCAGCCCGAAGAATGTCGGCGCCGATGGCAAGTGGATCGGCGACAGCGCCATCGGCAGCGGCTCGTTCAAGCTGAAGGAATGGCAAAAGGGCCAATACGTCACGCTGGAAAAATATGCCGGCTACAAGCCGCTGAAGGAAAAGGCGAGCGGCTACGCGGGCGACCGCACCGCATTGGTCGACGAGGCCAAATTCATGATCATCCCGGATACTTCGGCCGCCGAAACCGCCCTGTTTGCCGGGGAAATCGACGTGCTGGAGAATTTCGAATCGCAGCGCATCGAGGAAGCCAAGGGACGCGGCGTGCAGGTGATGACCACCGCCGGCCTGTCGCTGACGCCGCTTCTGATCCAGACGAACGATCCGCTGATGTCGAACGTCAAGCTGCGCCAGGCGATTGCCCATGCCATCGACTTCAAGCAGATCGCTGCCGCGCGCACGGCCGGCCTTGCGGAGTTCAATCCGTCCGGCGTGCCGCAGGCCAGCGCCTTCTTCGATCAGGATTTCCTGAAATGGCCGGATTACAATCCCGAAACCGCCAAGGCGCTGTTGGCCGAGGCCGGCTACAAGGGCGAAACGATCAAGATCCAGACCAACACCCGCTACCAGGGCATGTATGAAAACAGCGTGCTGGTGCAGGCGATGCTGGCGAGCGCCGGCATCAATGCCGAGCTGGAAGTGCTGGATTGGGCGGCCCAGCTCGACAATTATCTGGCCGGCAAGTTCCAGATGCAGTCCTTCGGTTATTCCGCCCGCCTCGATCCCTCGCAATTCTACGGCATCATCATCGGCGACAAGAAGACCGACCTGACGGCGCAGTGGGACAATCCCGAGGCCAACCAGTTGCTCCTGAAATCGACGAAGATGACGAATTTCGAGGAGCGCAAGGCGATCTTCAAGCAGATCCACGAATTGATGGCCAGGGATGTGCCGATCCTCGGCATCTATACGAGCCGGTCGTCGCCGCCGTCGGGGCCAAGATCGAAGGCTTTGCCGTGTGGCCGGCCGACAAGGAACGCGCCTGGGGCGTCAAGAAGAACTGAGCCTCTTTCCCATCGAGATGAAAGGCGGGCAAACCCGCCTTTTTTCATGGGCGTTTTGCCGCTTCGGGAGAGCTTGTAA
PROTEIN sequence
Length: 541
MNRIFLISTALAAGLLFGAAAQASTLNIRINADIRGVEGLNRDANTDTVLHHIFETLVGFRDDLTIGPVLAESWTVSDDGKTYTFTLRDGATFHNGDPVTSADVKWNWDRRVAAGAAWFCNAFFDGSQGLKVEAVETPDPRTVVFKINEPNALFLAQLANIQCNAWIASPKNVGADGKWIGDSAIGSGSFKLKEWQKGQYVTLEKYAGYKPLKEKASGYAGDRTALVDEAKFMIIPDTSAAETALFAGEIDVLENFESQRIEEAKGRGVQVMTTAGLSLTPLLIQTNDPLMSNVKLRQAIAHAIDFKQIAAARTAGLAEFNPSGVPQASAFFDQDFLKWPDYNPETAKALLAEAGYKGETIKIQTNTRYQGMYENSVLVQAMLASAGINAELEVLDWAAQLDNYLAGKFQMQSFGYSARLDPSQFYGIIIGDKKTDLTAQWDNPEANQLLLKSTKMTNFEERKAIFKQIHELMARDVPILGIYTSRSSPPSGPRSKALPCGRPTRNAPGASRRTEPLSHRDERRANPPFFMGVLPLRESL*