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SCNpilot_cont_500_bf_scaffold_5159

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5159_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..325
DNA (324bp) protein (108aa)
Ribulokinase 2 {ECO:0000313|EMBL:EYR78692.1}; EC=2.7.1.16 {ECO:0000313|EMBL:EYR78692.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Ribulokinase 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHN0_9RHIZ
Pentulose kinase
SCNpilot_cont_500_bf_scaffold_5159_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

715..1566
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4D7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR81666.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
poly(aspartic acid) hydrolase rbh
SCNpilot_cont_500_bf_scaffold_5159_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1600..3222
DNA (1623bp) protein (541aa)
Extracellular solute-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D8Q8_9RHIZ rbh
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:EYR81665.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC superfamily ATP binding cassette transporter substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_5159_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3245..3982)
DNA (738bp) protein (246aa)
UPI0003CF9FF8 related cluster n=1 Tax=unknown RepID=UPI0003CF9FF8
Uncharacterized protein {ECO:0000313|EMBL:ESZ21668.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
MOSC domain-containing protein; K07140
SCNpilot_cont_500_bf_scaffold_5159_5
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3986..4855)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BVE1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM73543.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
poly(aspartic acid) hydrolase
SCNpilot_cont_500_bf_scaffold_5159_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4852..6462)
DNA (1611bp) protein (537aa)
peptide ABC transporter nucleotide binding/ATPase protein (EC:3.6.3.-)
ABC-type uncharacterized transport system, duplicated ATPase component n=1 Tax=Rhizobium sp. CF080 RepID=J2IU74_9RHIZ rbh
ABC-type transport system, duplicated ATPase component {ECO:0000313|EMBL:EYR81667.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_500_bf_scaffold_5159_7
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6732..7322
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1F2P6_AMPQE
Uncharacterized protein {ECO:0000313|EMBL:KIJ72959.1}; Flags: Fragment;; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5159_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7289..8230)
DNA (942bp) protein (314aa)
Peptide ABC transporter permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5J5_9RHIZ rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:EYR81669.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_5159_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8212..9132)
DNA (921bp) protein (307aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EN50_9RHIZ rbh
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:EYR81670.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase
SCNpilot_cont_500_bf_scaffold_5159_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9539..10462
DNA (924bp) protein (308aa)
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFA8_9RHIZ rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR81671.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
bphR; GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5159_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10549..11052)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QG60_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83864.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_cont_500_bf_scaffold_5159_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11156..11542)
DNA (387bp) protein (129aa)
Conserved hypothetical exported protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MES2_RHIL3
hypothetical protein
Conserved hypothetical exported protein {ECO:0000313|EMBL:CAK08553.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_500_bf_scaffold_5159_13
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11838..12701
DNA (864bp) protein (288aa)
Pantothenate synthetase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YIN6_PARAH
pantothenate synthetase
Pantothenate synthetase {ECO:0000313|EMBL:AGT11338.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_500_bf_scaffold_5159_14
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12712..13290
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XUZ6_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT11339.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_500_bf_scaffold_5159_15
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13335..14099)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y6Y5_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT11340.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Displaying 15 items

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