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SCNpilot_cont_500_bf_scaffold_6494_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2123..2542)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=2 Tax=Agrobacterium RepID=Q7CZF2_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 139.0
  • Bit_score: 270
  • Evalue 9.20e-70
dksA; dnaK deletion suppressor protein; K06204 DnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 139.0
  • Bit_score: 270
  • Evalue 2.90e-70
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 139.0
  • Bit_score: 270
  • Evalue 1.30e-69

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Taxonomy

Agrobacterium sp. ATCC 31749 → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
TTGAGTGAGAAGATCGATCTTAACAACTATGTTCTCTCGGAATCCGATGAGTTCATGAATGCCAGCCAGCGTGCCTATTTTCGCGCAAAACTGATCGCATGGAAAAACGACATCCTGCGTGAAGCCCGCGAAACGCTCGGGCATCTGGCTGAGGAAAGCGCAAATCATCCCGACTTGGCTGACCGTGCTTCGTCGGAAACCGACCGGGCGATCGAGCTCCGGGCGCGGGACCGGCAGCGCAAGCTGATTTCGAAAATCGATGCAGCCTTGCAGCGGATCGACGACGGCACCTACGGCTACTGTGAGGAGACAGGTGAGCCGATCGGTCTGAAGCGGCTCGACGCTCGTCCGATCGCAACCCTGTCGATCGAGGCCCAGGAGCGTCACGAGCGGCGCGAGAAGGTCTATCGGGACGAGTAA
PROTEIN sequence
Length: 140
LSEKIDLNNYVLSESDEFMNASQRAYFRAKLIAWKNDILREARETLGHLAEESANHPDLADRASSETDRAIELRARDRQRKLISKIDAALQRIDDGTYGYCEETGEPIGLKRLDARPIATLSIEAQERHERREKVYRDE*