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SCNpilot_cont_500_bf_scaffold_6494

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6494_1
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..894)
DNA (894bp) protein (298aa)
two-component sensor histidine kinase/response regulator hybrid protein; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
Two-component sensor histidine kinase/response regulator hybrid protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JFT1_AGRRK
Histidine kinase {ECO:0000313|EMBL:KEA06638.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_500_bf_scaffold_6494_2
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1195..2028
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NEV6_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF19623.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6494_3
Agrobacterium sp. ATCC 31749, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2123..2542)
DNA (420bp) protein (140aa)
RNA polymerase-binding transcription factor DksA n=2 Tax=Agrobacterium RepID=Q7CZF2_AGRT5
dksA; dnaK deletion suppressor protein; K06204 DnaK suppressor protein
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
SCNpilot_cont_500_bf_scaffold_6494_4
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2914..3396
DNA (483bp) protein (161aa)
phosphohistidine phosphatase; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Phosphohistidine phosphatase protein n=1 Tax=Rhizobium sp. RepID=L0NFK7_RHISP
Phosphohistidine phosphatase protein {ECO:0000313|EMBL:CCF19644.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SCNpilot_cont_500_bf_scaffold_6494_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3486..4112
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EF20_9RHIZ rbh
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative MarC family transmembrane protein; K05595 multiple antibiotic resistance protein rbh
SCNpilot_cont_500_bf_scaffold_6494_6
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4182..4355)
DNA (174bp) protein (58aa)
Acetyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FLX5_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:ESX80096.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_6494_7
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4737..5282)
DNA (546bp) protein (182aa)
Single-stranded DNA-binding protein n=1 Tax=Rhizobium sp. CF142 RepID=J1TI96_9RHIZ
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ssb; Single-stranded DNA-binding protein controls activity of RecBCD nuclease
SCNpilot_cont_500_bf_scaffold_6494_8
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5526..6161
DNA (636bp) protein (212aa)
UvrABC system protein A n=1 Tax=Rhizobium sp. CF080 RepID=J3BVA0_9RHIZ
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
Displaying 8 items

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