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SCNpilot_cont_500_bf_scaffold_8157_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 10929..11243

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAZ7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 105.0
  • Bit_score: 205
  • Evalue 3.60e-50
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 105.0
  • Bit_score: 206
  • Evalue 2.20e-50
rplM; putative 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 105.0
  • Bit_score: 204
  • Evalue 1.90e-50

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGGCAACTTTCGTTCAGAAGCCCGCAGAGGTGGAGAAGAAGTGGGTCATCATCGACGCCGAAGGGCTCGTCGTTGGCCGTCTCGCCTCCCTCATCGCCATGCGCCTGCGCGGCAAGCATAAGGCAACCTACACCCCCCACGTCGACGACGGCGACAACGTCATCGTCATCAACGCGGAGAAGGTCGCCCTCACCGGCAAGAAGTATTCCGACAAGACCTACTACTGGCACACCGGCTATCCGGGTGGCATCAAGGAGCGCACGGCTCGCCAGATCATCGAAGGCCGCTTCCCGGAGCGCGTCCTCGAGAAGGCC
PROTEIN sequence
Length: 105
MATFVQKPAEVEKKWVIIDAEGLVVGRLASLIAMRLRGKHKATYTPHVDDGDNVIVINAEKVALTGKKYSDKTYYWHTGYPGGIKERTARQIIEGRFPERVLEKA