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SCNpilot_cont_500_bf_scaffold_8157

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8157_1
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..686)
DNA (684bp) protein (228aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
ATP-dependent protease La; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HJA6_9RHIZ
SCNpilot_cont_500_bf_scaffold_8157_2
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1033..2307)
DNA (1275bp) protein (425aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QBP6_9RHIZ
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX
SCNpilot_cont_500_bf_scaffold_8157_3
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2616..3245)
DNA (630bp) protein (210aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] rbh
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Rhizobium RepID=J2J3F9_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_8157_4
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3631..4839
DNA (1209bp) protein (403aa)
Diguanylate cyclase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PMQ4_9RHIZ
Diguanylate cyclase {ECO:0000313|EMBL:CCM75198.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
Diguanylate cyclase (GGDEF) domain-containing protein
SCNpilot_cont_500_bf_scaffold_8157_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4836..6080
DNA (1245bp) protein (415aa)
Cytochrome P450 hydroxylase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XNJ3_RHIRD rbh
Cytochrome P450 hydroxylase {ECO:0000313|EMBL:EHH08736.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
Cytochrome P450 rbh
SCNpilot_cont_500_bf_scaffold_8157_6
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6145..6411)
DNA (267bp) protein (89aa)
Putative enzyme of the cupin superfamily n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0K0Q9_RHILV
Cupin {ECO:0000313|EMBL:KGD99333.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein; K06995
SCNpilot_cont_500_bf_scaffold_8157_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6466..7749)
DNA (1284bp) protein (428aa)
O-acetylhomoserine aminocarboxypropyltransferase protein (EC:2.5.1.49)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Rhizobium sp. RepID=L0NDT0_RHISP rbh
O-acetylhomoserine sulfhydrylase {ECO:0000313|EMBL:AHK43995.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCNpilot_cont_500_bf_scaffold_8157_8
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7907..8335)
DNA (429bp) protein (143aa)
CoA-binding protein domain protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U6L0_9RHIZ
CoA-binding protein {ECO:0000313|EMBL:KGD99329.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
putative CoA-binding protein
SCNpilot_cont_500_bf_scaffold_8157_9
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8451..8753
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAZ4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS50009.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8157_10
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8897..9733
DNA (837bp) protein (279aa)
membrane protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000364E78A
Uncharacterized protein {ECO:0000313|EMBL:GAK71162.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
putative transmembrane protein
SCNpilot_cont_500_bf_scaffold_8157_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9734..10561)
DNA (828bp) protein (276aa)
enoyl-CoA hydratase (EC:4.2.1.17) rbh
enoyl-CoA hydratase n=1 Tax=Rhizobium giardinii RepID=UPI00035F9C43 rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KEC75128.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
SCNpilot_cont_500_bf_scaffold_8157_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10929..11243
DNA (315bp) protein (105aa)
50S ribosomal protein L13 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAZ7_9RHIZ
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
rplM; putative 50S ribosomal protein L13
Displaying 12 items

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