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SCNpilot_cont_500_bf_scaffold_9238_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..166)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BD99F similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 55.0
  • Bit_score: 111
  • Evalue 2.80e-22
Transcriptional regulator LysR family {ECO:0000313|EMBL:EYR84291.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 55.0
  • Bit_score: 111
  • Evalue 3.90e-22
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 49.0
  • Bit_score: 74
  • Evalue 1.20e-11

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 165
ATGAATGGTTGCCCATGGGGCGTGCCGACCACGCTCGGATCGCGTATCCCCCTCGCATCGCTGATCCAGACGCTTGCCGTCGCCGAATATCTGAACTTCCGCCACGCGGCCAATGCGCTCGGCGTGGCGCAATCCAGCGTCAGCGCCCGCGTGAAGGCGCTGGAA
PROTEIN sequence
Length: 55
MNGCPWGVPTTLGSRIPLASLIQTLAVAEYLNFRHAANALGVAQSSVSARVKALE