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SCNpilot_cont_500_bf_scaffold_9238_4

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2062..2979)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BB541 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 305.0
  • Bit_score: 603
  • Evalue 1.00e-169
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:EYR84289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 305.0
  • Bit_score: 579
  • Evalue 2.80e-162
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 291.0
  • Bit_score: 411
  • Evalue 2.30e-112

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGATGACCTTAGTTCACACTCTCGCCGTCGCCGAATATCTGAACTTCCGCCACGCCGCCAATGCGCTCGGCGTGGCGCAATCCAGCGTCAGCGCCCGCGTGAAGGCGCTGGAAGAAGACCTTGGCATCGTTCTGTTCGAGCGCCATGCGCGGGGTGTTCGGTTGACCGAGGCGGGACGCCACTTCGTCGAGCGGATAGCCGCAGGCATCGACCAACTCGACCATGCGGTGAAGACCGCCGGCATGGCGGCAGCCGGAGAAAGCGGCCGGCTTCGCATCGGTATCCATGCCCTGATCCCTCGCAGCTTCCTCGCAAAGCTGATCGGCCAATACCGCGAAGACCACCCCGGCGTTGAAGTCGAAATGACCGAAGGTACGGCCCGCGATGCGGTCATGCAGCTTCGCGCCGACCGGCTGGACGTGGTGTTCGTGGCCGGCACGCCCGAGCTGCCCGACTGCCATTCCCGCCACATATGGACCGAACCGCTCGTGGCGGTGTTACCGGAGCGGCATCCGTTCGCCGAGCGGTCGGCCGTTACATGGGCCGATCTGGCGGGCGAGACGTTTCTTGTTCGGCATGGCGGCACTGGCCCGCAAGTTCATAGCCATATCGTGCTGCGCCATGCCGGACTCTGGCCCGCGCCGTCGATCCTGCGCTTCGACGTGGGGCGCGGCGCGCTGCTGTCCATGGTCGGACAGGGCTTCGGTATCACCATCGTCAGTGCGGCCACGGCGCTGTTGCCGTCAACCGGCATTGTCTTCTTGCCCTTCGCCGACGAGCCGGAGCCGGTCGCCTTCTCTGCTGTCTGGTCGCCGTCCAACCGCAGCGCGGCGCTTCGTAACCTGCTCAGTCTCGCCAACGACATGGGCCGGCAGGTCTGCACGAATTCGGTACTGCCACGGATAGCGAGGGCGTGA
PROTEIN sequence
Length: 306
MMTLVHTLAVAEYLNFRHAANALGVAQSSVSARVKALEEDLGIVLFERHARGVRLTEAGRHFVERIAAGIDQLDHAVKTAGMAAAGESGRLRIGIHALIPRSFLAKLIGQYREDHPGVEVEMTEGTARDAVMQLRADRLDVVFVAGTPELPDCHSRHIWTEPLVAVLPERHPFAERSAVTWADLAGETFLVRHGGTGPQVHSHIVLRHAGLWPAPSILRFDVGRGALLSMVGQGFGITIVSAATALLPSTGIVFLPFADEPEPVAFSAVWSPSNRSAALRNLLSLANDMGRQVCTNSVLPRIARA*