ggKbase home page

SCNpilot_cont_500_bf_scaffold_9238_6

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 4349..4975

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D7043 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 418
  • Evalue 4.10e-114
  • rbh
Tetracycline repressor protein class G {ECO:0000313|EMBL:GAJ30335.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 208.0
  • Bit_score: 416
  • Evalue 2.20e-113
tetracycline repressor protein class G similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 208.0
  • Bit_score: 395
  • Evalue 1.20e-107
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidomonas methanolica → Acidomonas → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGACCAAACTGGACAAGGGCACCGTGATCGCAGCGGCGCTGGAGCTGCTGAACGAGGTTGGCATGGACAACCTGACGACGCGAAAGCTCGCTGAACGCCTCAAGGTTCAGCAGCCTGCGCTTTACTGGCATTTCCAGAACAAGCGCGCGCTGCTTGACGCACTGGCCGAGGCAATGCTGACGGAACGCCACACCCGCTCGCTACCCGAAGAGAACGAAGACTGGCGGCTATTCCTGAAAGAGAACGCCCAGAGTTTCAGAACGGCGTTGCTCTATTATCGGGACGGGGCGCGCATCCATGCCGGCACTCGACCGACAGAACCGAATTTTGGCGCTGCCGAGACACAAATACGCTTTCTCTGCGCGGCGGGCTTTGGTCCGAAGCACGCTGTTTGGGCGCTCCGGGCGGTCAGTCACTATGTGGTCGGTTCCGTTCTCGAGCAGCAGGCATCTGATGCCGATGAGAGAGTTCCGGACAGGCCAGATGTGTCCGAGCAAGCACCGTCGTCCTTCCTGCACGATCTGTTTCACGAGTTGGAAACAGACGGCATGGATGCTGCGTTCAACTTCGGACTTAACAGCCTCATCGCGGGTTTCGAGCGGCTGCGTTCATCTACAACAGATTAG
PROTEIN sequence
Length: 209
MTKLDKGTVIAAALELLNEVGMDNLTTRKLAERLKVQQPALYWHFQNKRALLDALAEAMLTERHTRSLPEENEDWRLFLKENAQSFRTALLYYRDGARIHAGTRPTEPNFGAAETQIRFLCAAGFGPKHAVWALRAVSHYVVGSVLEQQASDADERVPDRPDVSEQAPSSFLHDLFHELETDGMDAAFNFGLNSLIAGFERLRSSTTD*