ggKbase home page

SCNpilot_cont_500_bf_scaffold_9620_20

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(15510..15983)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamD n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5Q5G3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 157.0
  • Bit_score: 282
  • Evalue 3.40e-73
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 157.0
  • Bit_score: 282
  • Evalue 4.80e-73
comL; competence lipoprotein; K05807 putative lipoprotein similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 157.0
  • Bit_score: 281
  • Evalue 1.40e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CCGE 510 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
TCCTATTCCAAGCAGATCGCCAACGTGACGCAGGACCAGCGCGCCGCCGCCAAGACCATCGAAGCGATGATGAAGGTGGTGCAGAACTATCCGAAGTCGCAATATGTCGACGACGCCCAGGCCAAGATCCGCTTCGCCCGCGATCAGCTCGCCGGCAAGGAAATGCAGATCGGCCGCTACTATCTGGAGCGCAAGGAATATCTGGCGGCGATCTCGCGCTTCCGCGTCGTCGTCGAGCAGTTCCCGAATACCAATCAGGTCGAGGAAGCGCTGGCGCGCCTCGTCGAGGCCTATTACGCCATGGGCATCGTGCAGGAGGCGCAGACCGCCGCCGCCGTGCTCGGCCATAACTATCCCGACAGCCAGTGGTATGCGGACAGCTACAAGCTGCTGCAGAGCGGCGGTGTCGAGCCGCGCGAGAGTTCCGGCTCCTGGATCGCGCGCGCCGGCAAGAAGCTGCTGCTGGGCTCCTGA
PROTEIN sequence
Length: 158
SYSKQIANVTQDQRAAAKTIEAMMKVVQNYPKSQYVDDAQAKIRFARDQLAGKEMQIGRYYLERKEYLAAISRFRVVVEQFPNTNQVEEALARLVEAYYAMGIVQEAQTAAAVLGHNYPDSQWYADSYKLLQSGGVEPRESSGSWIARAGKKLLLGS*