ggKbase home page

SCNpilot_cont_500_bf_scaffold_13098_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 2052..2255

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERK1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 67.0
  • Bit_score: 129
  • Evalue 1.60e-27
Cold shock protein {ECO:0000313|EMBL:EYR84585.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 67.0
  • Bit_score: 130
  • Evalue 7.80e-28
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 67.0
  • Bit_score: 119
  • Evalue 3.10e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCAACCGGTACCGTTAAGTTTTTCAATCAGGACAAGGGCTTTGGCTTCATCACCCCCGACAGCGGCGGGCAGGATGTCTTTGTCCACATCTCGGCCGTCCAGTCCGGGGGCCCGCTCAGGGACGGCGACAAGGTCAGCTACGACATCGGCCAGGATCGCAAGACCGGCAAGTCGAAGGCGGAAAACGTCCGCACGATGTAA
PROTEIN sequence
Length: 68
MATGTVKFFNQDKGFGFITPDSGGQDVFVHISAVQSGGPLRDGDKVSYDIGQDRKTGKSKAENVRTM*