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SCNpilot_cont_500_bf_scaffold_13098

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_13098_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..109)
DNA (108bp) protein (36aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rhizobium leguminosarum RepID=UPI000366D0BD
SCNpilot_cont_500_bf_scaffold_13098_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(156..515)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0K7Z1_RHILT
Conserved hypothethetical protein {ECO:0000313|EMBL:CDN58495.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_13098_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(512..826)
DNA (315bp) protein (105aa)
ArsR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI0003693656
regulatory protein ArsR
ArsR family transcriptional regulator {ECO:0000313|EMBL:KDP70790.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_cont_500_bf_scaffold_13098_4
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(912..1370)
DNA (459bp) protein (153aa)
PEP phosphonomutase-like enzyme n=1 Tax=Rhizobium sp. CF142 RepID=J1SWL3_9RHIZ
PEP phosphonomutase-like enzyme {ECO:0000313|EMBL:EJJ29633.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_13098_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2052..2255
DNA (204bp) protein (68aa)
Cold shock protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERK1_9RHIZ
Cold shock protein {ECO:0000313|EMBL:EYR84585.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_500_bf_scaffold_13098_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2453..3574
DNA (1122bp) protein (374aa)
Fosmidomycin resistance protein Fsr n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLJ2_9RHIZ rbh
Fosmidomycin resistance protein {ECO:0000313|EMBL:KDP75639.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
major facilitator superfamily transporter rbh
SCNpilot_cont_500_bf_scaffold_13098_7
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3662..5305
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000375B44B rbh
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family rbh
Na+/H+ antiporter {ECO:0000313|EMBL:ACB94870.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_13098_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5315..6034)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037F02A0
DNA-binding response regulator in two-component regulatory system wtih UhpB {ECO:0000313|EMBL:CDX19118.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
two component LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_13098_9
unknown

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comp(5997..6086)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 9 items

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