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SCNpilot_cont_500_bf_scaffold_13822_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 257..427

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirD4 component n=1 Tax=Rhizobium sp. CF142 RepID=J1SPX7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 44.0
  • Bit_score: 82
  • Evalue 1.90e-13
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:EJJ27303.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 44.0
  • Bit_score: 82
  • Evalue 2.70e-13
type IV secretory pathway VirD4 components; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 52.0
  • Bit_score: 67
  • Evalue 2.00e-09

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGAACGGTATCGTTCTGGATCAGGTGCCGCGCCGGATGCGGCGCGGCATTGAACTCGGTTTTTATCGCGGCAAGCCGCTCATCTACGACGGCACCGAACCCGTTGCGATTGATGCGCAAGCCGGTAAAGGCACACGCTCTATCGCGGTCTTCCAGACAATGACACGCTGA
PROTEIN sequence
Length: 57
MNGIVLDQVPRRMRRGIELGFYRGKPLIYDGTEPVAIDAQAGKGTRSIAVFQTMTR*