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SCNpilot_cont_500_bf_scaffold_13822_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 463..813

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 component n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUP5_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 82.0
  • Bit_score: 158
  • Evalue 5.60e-36
type IV secretory pathway VirD4 components; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 82.0
  • Bit_score: 158
  • Evalue 1.70e-36
Type IV secretory pathway VirD4 component {ECO:0000313|EMBL:ABA03996.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 82.0
  • Bit_score: 158
  • Evalue 7.80e-36

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGGTGCGCGGCTTCAACGTCAACATGAATCAGGTCAACGGGTCTGGCGACAATCTTTCGGAACAATCCCGCCCGCTCTTGCAGGTCGAGGACGTGCGCCGCGCCACGGGCGGCGAGTCCGGCCTTCTGGAATCCCGTGACCACGGTTATTTTACTGTCGATATGCCGAATTTCTGGGAGCGCCCTGAAATGTCCAGCATGCTGCGCGACGTGCGGCAAAAGCCCGACAAATATGCTTGGCTCGGCAAGGCAAGCCACCCCGCGCCGCTATCGTTGCCGATACCTGCGCCGATAACGCGCGAGGACGACGATATAGAGGCGATCTTGAGTGCATTGCAGGACGAGATTTAA
PROTEIN sequence
Length: 117
MVRGFNVNMNQVNGSGDNLSEQSRPLLQVEDVRRATGGESGLLESRDHGYFTVDMPNFWERPEMSSMLRDVRQKPDKYAWLGKASHPAPLSLPIPAPITREDDDIEAILSALQDEI*