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SCNpilot_cont_500_bf_scaffold_13992_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(661..954)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine transport system permease protein PotB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEH3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 95.0
  • Bit_score: 174
  • Evalue 4.80e-41
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:EYR79313.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 95.0
  • Bit_score: 174
  • Evalue 6.80e-41
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 99.0
  • Bit_score: 102
  • Evalue 9.50e-20

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
TTGACCGATACGCCTGACCGGCCCGTTCTCCTTCCGCGCTTCCGCTTTCGCGGCGCCGTCTGGCTGGCGACGCCGGCCGTGCTGGTGCTGCTCGCAGCCCTTGCCTATCCGCTCGCCATCGTCGTTGTCCGCAGTTTTACCGATCCGGCGCCGGGCTTCGACAATTACGTCTGGTTCTTCCAGTCAGCCGTCAACCGCACGGTGTTGCAGCGCACCTTCGTCGTCGCCGCCTGGGTGACGCTGGCATCGCTGATCTGCGCCTATCCTTACGCCTATGCCATGACTTCTGGCTGA
PROTEIN sequence
Length: 98
LTDTPDRPVLLPRFRFRGAVWLATPAVLVLLAALAYPLAIVVVRSFTDPAPGFDNYVWFFQSAVNRTVLQRTFVVAAWVTLASLICAYPYAYAMTSG*