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SCNpilot_cont_500_bf_scaffold_13992_9

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 4149..6119

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase clustered with Ku protein, LigD {ECO:0000313|EMBL:KIV67229.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KIV67229.1};; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 659.0
  • Bit_score: 977
  • Evalue 7.70e-282
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 659.0
  • Bit_score: 972
  • Evalue 9.50e-281
ATP-dependent DNA ligase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XUH1_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 659.0
  • Bit_score: 974
  • Evalue 4.60e-281

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Taxonomy

Rhizobium sp. UR51a → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1971
GTGTTGAAAAGCTGGGCGGTGACGCGCGGCCCCAGCATCGATCCCGGCGAAAAGCGGCTTGCCGTGCATGTCGAGGACCATCCGCTCTCCTATGGCGATTTCGAGGGCGCCATTCCCAAGGGGCAATATGGCGGCGGCACCGTCATCGTCTGGGATCGCGGCACCTGGAAACCGCTGGAGGATCCGCACAGGGGCTATCGCAAGGGCCATCTCGAATTCGAGCTGGAGGGCGAAAAGCTGCATGGCCGCTGGCATCTGGTGCGCATGAAGGGCCGGGCCGAGGAAAAGCGCGACAACTGGCTGCTGATCAAGAGCGAGGACGAGGCCGCCGATCCCGATGGCGACATCCTGAAGAAGCTGCCGGATTCGGTGAAATCGGGCCGCTCCATCGAGGAGGTGGCGCGCGCGCCCGGCGATAGCTGGAATTCGCGGCCCGTCGGCAAGGCGGCAAAGGCGGCACCCGCCAGGGCGCGGAAACCGCAGGTGCATGACTGGCCGAAGGGCGCGCGCAAACGCAAGCTGCTGGATTTCCTGCCGCCGGCGCTCGCCACCCTGAAGCCCAGCCCGCCGCGCGGGGAAAAATGGCTGCACGAAATCAAGTTCGACGGCTATCGCCTGCAGGCCCGCATCGACCACGGCGCGGTGAGGCTGCTGACCCGCAGCGGCCTCGACTGGACCGCGAAATTCGGGGACGCCATCCTCGACGCCCTGAAGGCGCTGCCGGTTTCCGAAGCGCTGATCGATGGCGAGGTGGTGGTGGAAAAGGCCAGCGGCTCCTCCGATTTCTCGCTGCTGCAGCAGGATTTGAGCGAGGGCCGCAAGGATCGTTTCACCTTCTATGCCTTCGACCTGATGCATCTCGACGGGCACGATCTCTGCCCGTCGCCACTGGAGGAACGCAAGGCGCTGCTCGAAAAGCTGCTGCCTGCGGCCACGCCGGCCCTGCGATACAGCGAGCATTTCGGCGAAAGCGGCGATCTCGTGCTCGAACATGCCTGCCGTCTCAGCCTCGAAGGCGTGGTTTCCAAGGATCGAACCGGCAAATATGTGTCGGGGCGCAAGGGAAGCTGGGTCAAGTCGAAATGTTCCGAAAGGCAGGAACTGGTGATCGGCGGCTTCGCACCGTCCTCGGTCTCGCCGCATGCCATCGGCTCGCTGGCGCTCGGCGTCTTCGAAAAAGAGGGCCTGCGGCATGTGGGCCGGGTCGGCACCGGTTTTACCCAGGCGGTCGCCGAGCAGCTTTTCGAACGCCTTAATGCGTTGCGCCAGGACGAAAGCCCGTTCGCCGACAGGCTGACGGCGCTGGAGCGCCGCGATCTCGTCTATGTCAGGCCGGAGCTGATCGCGGAAATCGAGTTTCGCAGGTGGTCGGCGGATGGCAATCTGCGCCATGCCTCTTTTCGGGGCCTGCGCGAGGACAAGGAGGCCGGCGAGGTGAAGCGGGAGTCGCCAGAAACCATGGAAGCGAAGACGCCTGTGGCGCGCAGCTCGGTCAAGCTCAGTCATCCCGACCGCATCTATTGGCCGGAGGAGGGGGTCACCAAGCAGGGGCTTGCCGATTATTATGCCGAGGTCTGGCCGCTGATGGCGCCCTTCGTCGTCGACCGGCCGCTGGCGCTGCTGCGCTGCCCGGAAGGCATCGGCGGACAACGCTTCTTCCAGAAGCATGCCTGGCGCGGCATGAACAAGACCATCGCCCGCATCGCCGATCCCAAGGATAAGGGCGGCGAGCCGCTGGTGCGCATCCTCGATTTCGACGGCCTCATCGGACTGGTGCAGGCCGCCGTGCTCGAAATCCACCCCTGGGGCACGACCACGAAGACCTGGGAAAGCCCCGACATGATCACCCTCGACCTCGACCCCGGCGAGGACGTCGCCTGGAGCGCGGTGATCGAGGCGGCGCTGAAACTCAAGGAGAAGATCGAGGCCGCCGGTCTCGTGCCTTTCGTCAAGACCTCCGGCGGCAAGGGC
PROTEIN sequence
Length: 657
VLKSWAVTRGPSIDPGEKRLAVHVEDHPLSYGDFEGAIPKGQYGGGTVIVWDRGTWKPLEDPHRGYRKGHLEFELEGEKLHGRWHLVRMKGRAEEKRDNWLLIKSEDEAADPDGDILKKLPDSVKSGRSIEEVARAPGDSWNSRPVGKAAKAAPARARKPQVHDWPKGARKRKLLDFLPPALATLKPSPPRGEKWLHEIKFDGYRLQARIDHGAVRLLTRSGLDWTAKFGDAILDALKALPVSEALIDGEVVVEKASGSSDFSLLQQDLSEGRKDRFTFYAFDLMHLDGHDLCPSPLEERKALLEKLLPAATPALRYSEHFGESGDLVLEHACRLSLEGVVSKDRTGKYVSGRKGSWVKSKCSERQELVIGGFAPSSVSPHAIGSLALGVFEKEGLRHVGRVGTGFTQAVAEQLFERLNALRQDESPFADRLTALERRDLVYVRPELIAEIEFRRWSADGNLRHASFRGLREDKEAGEVKRESPETMEAKTPVARSSVKLSHPDRIYWPEEGVTKQGLADYYAEVWPLMAPFVVDRPLALLRCPEGIGGQRFFQKHAWRGMNKTIARIADPKDKGGEPLVRILDFDGLIGLVQAAVLEIHPWGTTTKTWESPDMITLDLDPGEDVAWSAVIEAALKLKEKIEAAGLVPFVKTSGGKG