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SCNpilot_cont_500_bf_scaffold_14894_2

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(119..2119)

Top 3 Functional Annotations

Value Algorithm Source
pbpC; penicillin-binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-] similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 695.0
  • Bit_score: 964
  • Evalue 1.50e-278
Penicillin-binding protein 1C n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J7G7_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 695.0
  • Bit_score: 949
  • Evalue 1.60e-273
Penicillin-binding protein 1C {ECO:0000313|EMBL:ACM25139.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 695.0
  • Bit_score: 964
  • Evalue 6.80e-278

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2001
ATGCGCCGGCGGCATAAATTCGGGCTTGGCATCGTCGCGACCCTCCTTACGGGGTTCGTTGCTGTGCTCGGGCTCGATGCAGCCGACCGCGCCTTTCCGCCGCCGCTGAAAAAGGCCCGCCTCGTCTCGGCCGAGGTGGTGGATGCTGACGGGCAATTGCTGCGCGCCTTCGCGACGCCGGAGGGACGCTGGCGGCTGAAGACCACGGCCGCCGATGTCGATCCGCAATTCCTGCGCATGCTGGTCGCCTATGAGGACCAGCGCTTCTGGGAGCATCGCGGCGTCGATCCCATCGCGCTCGGCCGCGCCGCCTGGCAGTTCGTCACCCATGGGCGCATCGTCTCCGGCGCCTCGACGCTCTCCATGCAGCTTGCCCGGCTGATCGAGCCCCGCGACAGCCGCTCCATTCCCGCCAAGCTGAAACAGGTGGTGCGGGCGTTGCAGATCGAGCGGCGGCTGAGCAAGGCGGAGATTCTCGACCTCTATCTCACCCGCGCCCCCTATGGCGGCAATCTCGAAGGCGTGCGCGCCGCAAGCCTCGCCTATTTCGGCAAGGAGCCGAAGCGGTTGAGCGTCTCCGAAGCCGCCCTGCTTGTCACGCTACCGCAATTGCAGAAACTGCGACGCCCCGACCGGCATCTGCGGACGGCCACCGAGGCGCGCCAGCGCGTGCTGGACCGCATGGCGGTGGCCGATGTCGTCGGCGACGGCGAAAGCGCCCGCGCCGCCCTCATCCCTGTTCCGAACCGCCGCCTGCAACTGCCGGCTTTCGCCGCCCATCTTGCAGAAACCGCCATTCGCAAGCAGCCGGGCATAGCGCGCTACCAGACCACTCTGCGCCGCAGCACGCAGGCCGCGCTCGAATCCCTGGCGCAGGAGGCGGCGACGCGACTGGGGCCACGCCTGTCCGTCGCCATCGTCATGGCCGACGTCCATAGCGGCGCCATTCTCGGCGAGGTCGGCTCGGCCGATTATTTCGATCCCAGCCGCTCCGGCTGGATCGACATGACCCGCGTCAACCGCTCGCCCGGCTCGACGCTGAAACCCTTCATCTACGGCCTCGCCTTCGAGGAAGGGCTGGTGGCGCAGGAAACCATCATCGAGGACCGGCCGGCCGATTTCGCCGGTTATCGGCCACGCAATTTCGACATGACCTATCAAGGCGATGTCAGCGTGCGCACGGCGTTGCAGATGTCGCTGAACGTGCCGGCGGTGCGGCTGCTCGACGCGGTCGGGCCGACGCGGCTGATGGTGCGTTTCCGCCGCGCCGAGGTGCGCCCGGTACTGCCGACCAACGAGACGCCGGGGCTCGCCATTGGCCTCGGCGGCGTCGGGATTACGCTCAAGGATCTGGTGCAGCTCTATGCGGCGCTCGCCAATCGCGGCAGGCCGGTGCGGCTCGGCGATGGGCTGCGCGAGCAGCCTGCCGTTCTCGACGGCGCGCCGATCATGGATGTTGTCGCGGCATGGAATGTCGCCGACAGCCTTGCCGGCGTGTCGCCGCCGCTCGGCGTCTCCGGCGTCTGGGTCGGCCGCGCCGATAACGGCGCGGTGCCCGGACTGACCGGCTATGCCTCGGCCGCCGCCATCCTGTTCGAAGCCTTCGCCAAGTCCGGCCTTGCCATCGCCGCCCTGCCGCGTGCGCCGGCCGGCGCCATCCGTCTGCCGCAGACGCAATTGCCGGCGAGCCAGCGCCGTTTCGCGACGACGTCGGAGGGGTTGCTCTCGGCCTCCTCCCGCGAAGCCGCGCCGCGCATCATCTATCCGCCGGAAGGCGCACGCGTGGATCTCGGCCTGAAGCAGGGAACGGAGACAATGCCGCTTTCCCTGAAACTGCAGGGCGGCCGCGCACCCTTCCGCTGGCTCGCCAACGGCCGGCCGCTCAGCGAAGCCTCGCGCCGGCGCACGACGCAATGGATGCCGGACGGACAGGGTTATTCGACCCTGACAGTCATCGACGCCGCCGGCCGCGCCGCCAGCGTCCGCGTTTTCATCGAATGA
PROTEIN sequence
Length: 667
MRRRHKFGLGIVATLLTGFVAVLGLDAADRAFPPPLKKARLVSAEVVDADGQLLRAFATPEGRWRLKTTAADVDPQFLRMLVAYEDQRFWEHRGVDPIALGRAAWQFVTHGRIVSGASTLSMQLARLIEPRDSRSIPAKLKQVVRALQIERRLSKAEILDLYLTRAPYGGNLEGVRAASLAYFGKEPKRLSVSEAALLVTLPQLQKLRRPDRHLRTATEARQRVLDRMAVADVVGDGESARAALIPVPNRRLQLPAFAAHLAETAIRKQPGIARYQTTLRRSTQAALESLAQEAATRLGPRLSVAIVMADVHSGAILGEVGSADYFDPSRSGWIDMTRVNRSPGSTLKPFIYGLAFEEGLVAQETIIEDRPADFAGYRPRNFDMTYQGDVSVRTALQMSLNVPAVRLLDAVGPTRLMVRFRRAEVRPVLPTNETPGLAIGLGGVGITLKDLVQLYAALANRGRPVRLGDGLREQPAVLDGAPIMDVVAAWNVADSLAGVSPPLGVSGVWVGRADNGAVPGLTGYASAAAILFEAFAKSGLAIAALPRAPAGAIRLPQTQLPASQRRFATTSEGLLSASSREAAPRIIYPPEGARVDLGLKQGTETMPLSLKLQGGRAPFRWLANGRPLSEASRRRTTQWMPDGQGYSTLTVIDAAGRAASVRVFIE*