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SCNpilot_cont_500_bf_scaffold_17176_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

partial RP 38 / 55 MC: 2 BSCG 37 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(4489..5196)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00035DF640 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 235.0
  • Bit_score: 389
  • Evalue 3.00e-105
Multidrug transporter {ECO:0000313|EMBL:EPR20644.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 235.0
  • Bit_score: 389
  • Evalue 4.20e-105
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 235.0
  • Bit_score: 387
  • Evalue 2.70e-105

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
CTCGTCGTGCAAGGACTGAATGCCGATGCCACCAGCGAATGGTCGGGCAAGCTGATGGCGGCGATGCAGCAGGATCGCTCCTTCCAGGCGGTGACCTCGGATGCCCAGAACGGCGCCATCGCCGCCTCCGTCGTCATCGACCCGGAAAAGGCGGCGCAATTCGGCATCACCAACGACCAGCTTCGCAAGACTCTGGAAATGTCCTTCGGCGGCTATACGGCGGCGCAGATCCAGTCGACCGGCGACAGCTACAACGTCGACGTCGAATTCGACAACAGCCGCCCGTGGAGCGACGACATCCTTTCCGACATCAACGTGCTCTCGGCCAAGACGGGCGCGCTGGTGCCGCTGTCGAATTTCGCCACCGTCCAGCGCGTGCCGGCCCCGGTCACCATCAACCAGACCGGCCAGCTCGTTTCCACCACCATCTCCTTCAACCTGCCGGACGGCGTGGCGCTGTCCGACGCCATGGCCCGGATCGATGCGATCAAGGCAAGCCTCGGCATGCCATCGGACGTCTTTACCACCTATGGCGGGGCGGCGGCGATCTTCCAGCAGTCGCAAGGCAATACCGGCCTGCTGATCCTCGCCGCCGTGCTGACCATCTATGTGGTCCTCGGCGTGCTCTATGAGAGCTTCGTGCATCCGCTGACCATCCTCTCCGGCCTGCCCGCCGCCGCCTTCGGGGCGCTGCTGGCCCTGAAATGA
PROTEIN sequence
Length: 236
LVVQGLNADATSEWSGKLMAAMQQDRSFQAVTSDAQNGAIAASVVIDPEKAAQFGITNDQLRKTLEMSFGGYTAAQIQSTGDSYNVDVEFDNSRPWSDDILSDINVLSAKTGALVPLSNFATVQRVPAPVTINQTGQLVSTTISFNLPDGVALSDAMARIDAIKASLGMPSDVFTTYGGAAAIFQQSQGNTGLLILAAVLTIYVVLGVLYESFVHPLTILSGLPAAAFGALLALK*