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SCNpilot_cont_500_bf_scaffold_17176

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_17176_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..263
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EP43_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80980.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_17176_2
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

278..787
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI0003807247
Uncharacterized protein {ECO:0000313|EMBL:KEC79834.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_17176_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(810..1430)
DNA (621bp) protein (207aa)
Putative transmembrane protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MCE6_RHIL3
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:CAK09385.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_500_bf_scaffold_17176_4
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1530..2273)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3H9E9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE95522.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_17176_5
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2286..2495)
DNA (210bp) protein (70aa)
cobalt transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI00036DB144
Uncharacterized protein {ECO:0000313|EMBL:CDM59028.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_17176_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2710..3168
DNA (459bp) protein (153aa)
Probable phosphoglycerate mutase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98MW8_RHILO
Putative phosphoglycerate mutase {ECO:0000313|EMBL:CDX40808.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphoglycerate mutase
SCNpilot_cont_500_bf_scaffold_17176_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3172..3690)
DNA (519bp) protein (173aa)
RES domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ78_XANP2
RES domain-containing protein
RES domain protein {ECO:0000313|EMBL:ABS70174.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_17176_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3693..4043)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWF6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83886.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_17176_9
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4106..4492)
DNA (387bp) protein (129aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JU61_AGRVS
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:ACM35989.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_17176_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4489..5196)
DNA (708bp) protein (236aa)
multidrug transporter n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00035DF640
Multidrug transporter {ECO:0000313|EMBL:EPR20644.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
AcrB/AcrD/AcrF family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Displaying 10 items

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