ggKbase home page

SCNpilot_cont_500_bf_scaffold_18390

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_18390_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..236
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEN6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97927.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_500_bf_scaffold_18390_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425..586)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95350.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_18390_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

890..1438
DNA (549bp) protein (183aa)
DJ-1/PfpI family protein; K05520 protease I [EC:3.2.-.-]
Protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W171_9GAMM
Protease {ECO:0000313|EMBL:EIL93212.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_18390_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1590..2621)
DNA (1032bp) protein (344aa)
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1]
Putative DNA ligase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W172_9GAMM
Putative DNA ligase family protein {ECO:0000313|EMBL:EIL93213.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_18390_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2570..4060)
DNA (1491bp) protein (497aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
Putative DNA ligase family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W172_9GAMM rbh
Putative DNA ligase family protein {ECO:0000313|EMBL:EIL93213.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
SCNpilot_cont_500_bf_scaffold_18390_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4067..4363)
DNA (297bp) protein (99aa)
Short chain dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W173_9GAMM
Short chain dehydrogenase {ECO:0000313|EMBL:EIL93214.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative short-chain dehydrogenase/reductase
SCNpilot_cont_500_bf_scaffold_18390_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4518..5627
DNA (1110bp) protein (370aa)
Probable DNA repair protein UU7_09515 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W174_9GAMM
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative Ku domain-containing protein
SCNpilot_cont_500_bf_scaffold_18390_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5642..6010)
DNA (369bp) protein (123aa)
GAF sensor hybrid histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W180_9GAMM
GAF sensor hybrid histidine kinase {ECO:0000313|EMBL:EIL93221.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator
SCNpilot_cont_500_bf_scaffold_18390_9
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6101..7255)
DNA (1155bp) protein (385aa)
Small-conductance mechanosensitive ion channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E3_9GAMM
mechanosensitive ion channel family protein rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCNpilot_cont_500_bf_scaffold_18390_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7469..8995)
DNA (1527bp) protein (509aa)
Cation transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W185_9GAMM
Cation transport protein {ECO:0000313|EMBL:EIL93226.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cation diffusion facilitator family protein rbh
SCNpilot_cont_500_bf_scaffold_18390_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9341..10834
DNA (1494bp) protein (498aa)
Two-component hybrid sensor and regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W188_9GAMM
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:EIL93229.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
two component sensor kinase
Displaying 11 items

View Taxonomy