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SCNpilot_cont_500_bf_scaffold_11953

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_11953_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..497)
DNA (495bp) protein (165aa)
Protein translocase subunit SecD n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEF5_9GAMM
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein-export membrane protein, SecD/SecF family
SCNpilot_cont_500_bf_scaffold_11953_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(656..982)
DNA (327bp) protein (109aa)
Preprotein translocase subunit YajC n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS4_9GAMM
preprotein translocase, YajC subunit
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:AGG88223.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_11953_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1183..2346)
DNA (1164bp) protein (388aa)
tRNA-guanine transglycosylase (EC:2.4.2.29) rbh
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Queuine tRNA-ribosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NE69_9GAMM rbh
SCNpilot_cont_500_bf_scaffold_11953_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2406..3452)
DNA (1047bp) protein (349aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5F0_9GAMM rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
SCNpilot_cont_500_bf_scaffold_11953_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3534..3902)
DNA (369bp) protein (123aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3]
RNA-splicing ligase RtcB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5E9_9GAMM
Displaying 5 items

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