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SCNpilot_cont_500_bf_scaffold_8619

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8619_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..131
DNA (129bp) protein (43aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB23_9GAMM
SCNpilot_cont_500_bf_scaffold_8619_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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182..778
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYC8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96663.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8619_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(857..1180)
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W425_9GAMM
Ferredoxin {ECO:0000313|EMBL:EIL94216.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ferredoxin
SCNpilot_cont_500_bf_scaffold_8619_trna_1
unknown

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comp(1513..1585)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_8619_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1689..3038
DNA (1350bp) protein (450aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Poly(A) polymerase I n=1 Tax=Rhodanobacter denitrificans RepID=M4NFN8_9GAMM rbh
poly(A) polymerase rbh
SCNpilot_cont_500_bf_scaffold_8619_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3491..4321
DNA (831bp) protein (277aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHU9_9GAMM
SCNpilot_cont_500_bf_scaffold_8619_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4339..5184
DNA (846bp) protein (282aa)
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
Pantothenate synthetase n=1 Tax=Rhodanobacter denitrificans RepID=M4NPX0_9GAMM
SCNpilot_cont_500_bf_scaffold_8619_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5216..5674
DNA (459bp) protein (153aa)
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Aspartate 1-decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYD4_9GAMM
SCNpilot_cont_500_bf_scaffold_8619_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5726..6820)
DNA (1095bp) protein (365aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Epoxyqueuosine reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB15_9GAMM rbh
iron-sulfur cluster binding protein, putative
SCNpilot_cont_500_bf_scaffold_8619_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6850..8277
DNA (1428bp) protein (476aa)
YjeF-like protein, hydroxyethylthiazole kinase-related protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYD6_9GAMM
yjeF-like protein, hydroxyethylthiazole kinase-related protein
YjeF-like protein, hydroxyethylthiazole kinase-related protein {ECO:0000313|EMBL:AGG89673.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_8619_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8274..8747
DNA (474bp) protein (158aa)
ATPase, YjeE family n=1 Tax=Rhodanobacter denitrificans RepID=M4NHU4_9GAMM
ATPase, YjeE family
ATPase, YjeE family {ECO:0000313|EMBL:AGG89672.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_500_bf_scaffold_8619_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8928..10307
DNA (1380bp) protein (460aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W416_9GAMM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EIL94207.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
N-acetylmuramoyl-L-alanine amidase
SCNpilot_cont_500_bf_scaffold_8619_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10348..11100
DNA (753bp) protein (251aa)
DNA mismatch repair protein MutL n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W415_9GAMM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA mismatch repair protein MutL
Displaying 13 items

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