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SCNpilot_cont_500_bf_scaffold_6800

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6800_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..151)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91448.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6800_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(287..796)
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW4_9GAMM
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
SCNpilot_cont_500_bf_scaffold_6800_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(871..2514)
DNA (1644bp) protein (548aa)
Alpha,alpha-trehalase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH34_9GAMM rbh
Alpha,alpha-trehalase {ECO:0000313|EMBL:EIL98775.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
neutral trehalase rbh
SCNpilot_cont_500_bf_scaffold_6800_4
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2511..4805)
DNA (2295bp) protein (765aa)
Trehalose/maltose hydrolase or phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB95_9GAMM
trehalose/maltose hydrolase or phosphorylase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
SCNpilot_cont_500_bf_scaffold_6800_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4933..7398)
DNA (2466bp) protein (822aa)
Outer membrane receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ82_9GAMM
Outer membrane receptor protein {ECO:0000313|EMBL:AGG87861.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
outer membrane receptor protein
SCNpilot_cont_500_bf_scaffold_6800_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7579..7953)
DNA (375bp) protein (125aa)
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW59_9GAMM
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane {ECO:0000313|EMBL:EIL91450.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3HB-oligomer hydrolase (3HBOH)
SCNpilot_cont_500_bf_scaffold_6800_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9374..10033
DNA (660bp) protein (220aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WVA2_9GAMM rbh
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_6800_8
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10232..11938
DNA (1707bp) protein (569aa)
hypothetical protein rbh
hypothetical protein id=24657759 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_500_bf_scaffold_6800_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11984..12934)
DNA (951bp) protein (317aa)
cysteine synthase (EC:2.5.1.47) rbh
Pyridoxal-5'-phosphate-dependent enzyme subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWA8_9GAMM rbh
Pyridoxal-5'-phosphate-dependent enzyme subunit beta {ECO:0000313|EMBL:EIL91499.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Displaying 9 items

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