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SCNpilot_cont_500_bf_scaffold_5746

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5746_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(3..1559)
DNA (1557bp) protein (519aa)
Putative ABC transporter substrate binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7J1_CALAS rbh
putative ABC transporter substrate binding protein rbh
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:BAM01229.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_cont_500_bf_scaffold_5746_2
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1646..2647)
DNA (1002bp) protein (334aa)
LacI family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFV1_9RHIZ
LacI family transcriptional regulator {ECO:0000313|EMBL:ESX72466.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5746_3
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3343..3816
DNA (474bp) protein (158aa)
transposase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F737
transposase
Transposase {ECO:0000313|EMBL:AFW03132.1}; TaxID=1224746 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans H24.;"
SCNpilot_cont_500_bf_scaffold_5746_4
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3846..4124
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4QRD2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ81738.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
transposase
SCNpilot_cont_500_bf_scaffold_5746_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4311..5225)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036DFB38 rbh
Transcriptional regulator {ECO:0000313|EMBL:EIM25391.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
transcriptional regulator protein
SCNpilot_cont_500_bf_scaffold_5746_6
Pseudomonas psychrotolerans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5325..6395
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035CA495 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK72776.1}; TaxID=1112217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas psychrotolerans L19.;"
hypothetical protein; K09788 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_5746_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6450..8027
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368E920 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM34386.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1 rbh
SCNpilot_cont_500_bf_scaffold_5746_8
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8036..9535
DNA (1500bp) protein (500aa)
Hydrolase CocE/NonD family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZX62_9PROT
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:EHM02452.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
FIG00482872: hypothetical protein
SCNpilot_cont_500_bf_scaffold_5746_9
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9841..10812
DNA (972bp) protein (324aa)
Putative oligopeptide ABC transporter, permease protein AppB n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3N5_9PROT
Putative oligopeptide ABC transporter, permease protein AppB {ECO:0000313|EMBL:EHL98905.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_5746_10
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10809..11714
DNA (906bp) protein (302aa)
peptide ABC transporter permease n=1 Tax=Roseomonas sp. B5 RepID=UPI00030C76D8
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHP39902.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
ABC transporter permease; K15582 oligopeptide transport system permease protein
SCNpilot_cont_500_bf_scaffold_5746_11
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11724..12692
DNA (969bp) protein (323aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLQ5_9PROT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH11793.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_5746_12
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12689..13747
DNA (1059bp) protein (353aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLQ6_9PROT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH11794.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
dppF; Dipeptide transport ATP-binding (ABC superfamily)
SCNpilot_cont_500_bf_scaffold_5746_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13744..14664
DNA (921bp) protein (307aa)
Blr2321 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89SS9_BRADU
hypothetical protein
Blr2321 protein {ECO:0000313|EMBL:BAC47586.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_500_bf_scaffold_5746_14
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14826..15056)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB75884.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_cont_500_bf_scaffold_5746_15
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15043..15933)
DNA (891bp) protein (297aa)
UPI0003CE10A3 related cluster n=1 Tax=unknown RepID=UPI0003CE10A3
Transposase {ECO:0000313|EMBL:KFC70251.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
transposase
Displaying 15 items

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