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SCNpilot_cont_500_bf_scaffold_5960

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5960_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..337)
DNA (336bp) protein (112aa)
Transcriptional regulator, LuxR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QF64_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KKB84621.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5960_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(596..1906)
DNA (1311bp) protein (437aa)
Conjugal transfer protein TrbI n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSR0_9RHIZ rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:KKB84620.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
trbI; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10 rbh
SCNpilot_cont_500_bf_scaffold_5960_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1903..2370)
DNA (468bp) protein (156aa)
Conjugal transfer protein TrbH n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSQ9_9RHIZ
Conjugal transfer protein TrbH {ECO:0000313|EMBL:KKB84619.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
trbH; conjugal transfer protein TrbH
SCNpilot_cont_500_bf_scaffold_5960_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2374..3198)
DNA (825bp) protein (275aa)
Conjugal transfer protein TrbG n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSQ8_9RHIZ rbh
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KKB84618.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
trbG; conjugal transfer protein TrbG; K03204 type IV secretion system protein VirB9
SCNpilot_cont_500_bf_scaffold_5960_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3219..3881)
DNA (663bp) protein (221aa)
Conjugal transfer protein TrbF n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSQ7_9RHIZ rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KKB84617.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
trbF; conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 rbh
SCNpilot_cont_500_bf_scaffold_5960_6
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3891..5057)
DNA (1167bp) protein (389aa)
Conjugal transfer protein TrbL n=2 Tax=Oligotropha carboxidovorans RepID=F8BQU8_OLICM rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:KKB84616.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
trbL; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL rbh
SCNpilot_cont_500_bf_scaffold_5960_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5245..6045)
DNA (801bp) protein (267aa)
Conjugal transfer protein TrbJ n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT56_9RHIZ rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KKB84614.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
trbJ; conjugal transfer protein TrbJ
SCNpilot_cont_500_bf_scaffold_5960_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6017..6616)
DNA (600bp) protein (200aa)
Conjugal transfer protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JPG6_AGRRK
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KKB84613.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
trbE; conjugal transfer protein TrbE; K03199 type IV secretion system protein VirB4
Displaying 8 items

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