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SCNpilot_cont_500_bf_scaffold_17828

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_17828_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..388)
DNA (387bp) protein (129aa)
conjugal transfer protein TraG n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000363D9D3
Conjugal transfer protein TraG {ECO:0000313|EMBL:KKB84630.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4
SCNpilot_cont_500_bf_scaffold_17828_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(375..590)
DNA (216bp) protein (72aa)
Putative TraD n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT18_9RHIZ
Conjugal transfer protein TraD {ECO:0000313|EMBL:KKB84629.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
traDb; conjugal transfer protein TraD
SCNpilot_cont_500_bf_scaffold_17828_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(595..858)
DNA (264bp) protein (88aa)
Conjugal transfer protein TraC n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT17_9RHIZ
Conjugal transfer protein TraC {ECO:0000313|EMBL:KKB84628.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
conjugal transfer protein TraC
SCNpilot_cont_500_bf_scaffold_17828_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(973..2172)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XGX8_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL55134.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_17828_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2333..4207
DNA (1875bp) protein (625aa)
Dtr system oriT relaxase n=1 Tax=Rhizobium giardinii RepID=UPI00036E31DC
Dtr system oriT relaxase {ECO:0000313|EMBL:KKB84725.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
traA; Dtr system oriT relaxase
SCNpilot_cont_500_bf_scaffold_17828_6
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4204..4737
DNA (534bp) protein (178aa)
Conjugal transfer pilin processing protease TraF n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT14_9RHIZ
Conjugal transfer protein TraF {ECO:0000313|EMBL:KKB84627.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
traF; conjugal transfer pilin processing protease TraF
SCNpilot_cont_500_bf_scaffold_17828_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4727..5164
DNA (438bp) protein (146aa)
Conjugal transfer protein TraB n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BT13_9RHIZ
Conjugal transfer protein TraB {ECO:0000313|EMBL:KKB84626.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
conjugal transfer protein TraB
Displaying 7 items

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