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SCNpilot_cont_500_bf_scaffold_7414

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7414_1
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..362
DNA (360bp) protein (120aa)
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KGR80516.1}; EC=1.1.1.30 {ECO:0000313|EMBL:KGR80516.1};; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
3-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
Short chain dehydrogenase n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WJM4_9BACI
SCNpilot_cont_500_bf_scaffold_7414_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(481..1347)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C411B rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT93120.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_500_bf_scaffold_7414_3
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1705..2289
DNA (585bp) protein (195aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH42_9SPHI
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EDM35123.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_7414_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2406..3614
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037811F6
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW00380.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_7414_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3649..7173
DNA (3525bp) protein (1175aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides massiliensis RepID=U6RQM0_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC59018.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
TonB-dependent transducer rbh
SCNpilot_cont_500_bf_scaffold_7414_6
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7209..8957
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZUX7_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC59020.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
RagB/SusD domain-containing protein
SCNpilot_cont_500_bf_scaffold_7414_7
unknown

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8981..9133
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7414_8
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9130..10557
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7J3L5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDE58509.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
Displaying 8 items

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