ggKbase home page

SCNpilot_cont_500_bf_scaffold_9157

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_9157_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..2166
DNA (2166bp) protein (722aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:AEW02970.1}; EC=2.7.10.2 {ECO:0000313|EMBL:AEW02970.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Capsular exopolysaccharide family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK32_NIAKG
capsular exopolysaccharide family protein
SCNpilot_cont_500_bf_scaffold_9157_2
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2214..3494
DNA (1281bp) protein (427aa)
O-antigen translocase n=1 Tax=Arcobacter butzleri (strain RM4018) RepID=A8ESM3_ARCB4
O-antigen translocase
Tax=RBG_16_Deltaproteobacteria_64_85_curated
SCNpilot_cont_500_bf_scaffold_9157_3
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3469..4134
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCT4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ41427.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_9157_4

Not on your lists

4135..5394
DNA (1260bp) protein (420aa)
glycosyl transferase, group 1 id=126178 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EKD29076.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
group 1 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_9157_5
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

5402..6019
DNA (618bp) protein (206aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Arcobacter butzleri JV22 RepID=E6L2W7_9PROT
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
SCNpilot_cont_500_bf_scaffold_9157_6
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6019..6786
DNA (768bp) protein (256aa)
Imidazole glycerol phosphate synthase {ECO:0000313|EMBL:EZH72294.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
Imidazole glycerol phosphate synthase, cyclase subunit id=4885414 bin=GWC2_Planctomycete_KSU_39_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hisF; imidazole glycerol phosphate synthase subunit HisF
SCNpilot_cont_500_bf_scaffold_9157_7
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6913..7719
DNA (807bp) protein (269aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS07399.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
N-acetyl sugar amidotransferase id=4386288 bin=GWF2_Bacteroidetes_40_13 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
ExsB family protein
SCNpilot_cont_500_bf_scaffold_9157_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7685..8107
DNA (423bp) protein (141aa)
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:GAO45219.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ExsB family protein id=4885446 bin=GWC2_Planctomycete_KSU_39_26 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
ExsB family protein
SCNpilot_cont_500_bf_scaffold_9157_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8507..9292
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Sulfurovum sp. SCGC AAA036-F05 RepID=UPI000376CE40
group 1 family glycosyl transferase
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:AAZ24496.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio; psychroerythus).;"
SCNpilot_cont_500_bf_scaffold_9157_10
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9383..10585
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002F3E46A
Uncharacterized protein {ECO:0000313|EMBL:KEO54702.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 10166.;"
group 1 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_9157_11
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10766..11062
DNA (297bp) protein (99aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
Uncharacterized protein n=1 Tax=Paenibacillus polymyxa CR1 RepID=V5X2Z8_PAEPO
Displaying 11 items

View Taxonomy