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SCNpilot_cont_500_bf_scaffold_8405

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8405_1
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..779)
DNA (777bp) protein (259aa)
Putative outer membrane protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAF9_9SPHI
Putative outer membrane protein {ECO:0000313|EMBL:EDM37350.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
TonB-dependent receptor plug
SCNpilot_cont_500_bf_scaffold_8405_2
unknown

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comp(958..1134)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8405_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1149..2042)
DNA (894bp) protein (298aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKQ3_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEV99732.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8405_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2080..2694)
DNA (615bp) protein (205aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8D8_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV99108.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8405_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2866..3780)
DNA (915bp) protein (305aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKT5_9SPHI rbh
ATPase {ECO:0000313|EMBL:ETZ22747.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
activator of Hsp90 ATPase 1 family protein rbh
SCNpilot_cont_500_bf_scaffold_8405_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3957..4949
DNA (993bp) protein (331aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CFI1_SPHS2 rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ79134.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_500_bf_scaffold_8405_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5318..5785
DNA (468bp) protein (156aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381E067
alkylhydroperoxidase-like protein
SCNpilot_cont_500_bf_scaffold_8405_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5813..6109
DNA (297bp) protein (99aa)
YCII-related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPM0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:ETZ23385.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
Displaying 8 items

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