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SCNpilot_cont_500_bf_scaffold_8449

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8449_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..154)
DNA (153bp) protein (51aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003786B14
SCNpilot_cont_500_bf_scaffold_8449_2
Mangrovimonas yunxiaonensis, Mangrovimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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699..1796
DNA (1098bp) protein (366aa)
AraC family transcriptional regulator protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0LXR5_GRAFK rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KFB01892.1}; TaxID=1197477 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Mangrovimonas.;" source="Mangrovimonas yunxiaonensis.;"
AraC family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_8449_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1989..2675
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377C1A4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_8449_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2766..3707
DNA (942bp) protein (314aa)
Cytochrome c class I n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRE6_SPILD
Cytochrome C {ECO:0000313|EMBL:KIC95249.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cytochrome C class I
SCNpilot_cont_500_bf_scaffold_8449_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3718..4143
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGB1_NIAKG
hypothetical protein; K09004 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02750.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8449_6
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4183..5493
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI00031CAD56 rbh
FAD linked oxidase domain-containing protein rbh
Tax=CG_Flavo_01
SCNpilot_cont_500_bf_scaffold_8449_7
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5758..6798
DNA (1041bp) protein (347aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036279CD rbh
SCNpilot_cont_500_bf_scaffold_8449_8
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6872..7408
DNA (537bp) protein (179aa)
Cerebroside-sulfatase {ECO:0000313|EMBL:ADZ81075.1}; EC=3.1.6.8 {ECO:0000313|EMBL:ADZ81075.1};; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Cerebroside-sulfatase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLR4_9SPHI
Cerebroside-sulfatase
SCNpilot_cont_500_bf_scaffold_8449_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7405..8187
DNA (783bp) protein (261aa)
Arylsulfatase {ECO:0000313|EMBL:EFK56467.1}; EC=3.1.6.- {ECO:0000313|EMBL:EFK56467.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
Arylsulfatase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VRR6_9SPHI
Cerebroside-sulfatase
SCNpilot_cont_500_bf_scaffold_8449_10
unknown

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8159..8413
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8449_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8601..9200
DNA (600bp) protein (200aa)
ABC transporter related protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YG08_9SPHI
ABC transporter related protein {ECO:0000313|EMBL:EHQ26296.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
phosphonate-transporting ATPase
SCNpilot_cont_500_bf_scaffold_8449_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9270..10715
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368CD2C rbh
Transporter {ECO:0000313|EMBL:KIC93720.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
tolC; outer membrane efflux protein; K12340 outer membrane channel protein rbh
SCNpilot_cont_500_bf_scaffold_8449_13
unknown

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10800..10883
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 13 items

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