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SCNpilot_cont_500_bf_scaffold_8601

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8601_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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36..1817
DNA (1782bp) protein (594aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1R1_PEDHD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU05053.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_500_bf_scaffold_8601_2
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1830..2519
DNA (690bp) protein (230aa)
RagB/SusD domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWB3_PEDHD
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACU04192.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_500_bf_scaffold_8601_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2479..3066
DNA (588bp) protein (196aa)
RagB/SusD domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZ27_9SPHI
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EHQ24612.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RagB/SusD domain-containing protein
SCNpilot_cont_500_bf_scaffold_8601_4
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3193..4464
DNA (1272bp) protein (424aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEI4_SPHS2
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADZ76679.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_500_bf_scaffold_8601_5
unknown

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comp(4539..4826)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8601_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4936..5298)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC81_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00388.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8601_7
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(5392..6369)
DNA (978bp) protein (326aa)
Transcriptional regulator, AraC family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XAL3_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:KIF28365.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
transcriptional regulator, AraC family
SCNpilot_cont_500_bf_scaffold_8601_8
unknown

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comp(6878..7042)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8601_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7049..7336)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003620A0F
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_cont_500_bf_scaffold_8601_10
unknown

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7641..8429
DNA (789bp) protein (263aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8601_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8501..9034)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364D0C4
KilA-N, DNA-binding domain-containing protein
KilA-N, DNA-binding domain protein {ECO:0000313|EMBL:AEW01140.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8601_12
unknown

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comp(9041..9178)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8601_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9331..9951
DNA (621bp) protein (207aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Lipid A biosynthesis acyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIP9_NIAKG
Lipid A biosynthesis acyltransferase {ECO:0000313|EMBL:AEW02902.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 13 items

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