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SCNpilot_cont_500_bf_scaffold_8640

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8640_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..732
DNA (732bp) protein (244aa)
AAA ATPase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGH0_CHIPD
ATPase AAA
AAA ATPase {ECO:0000313|EMBL:ACU59902.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_8640_2
CG_Arma_01, Armatimonadetes, Bacteria

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comp(734..2299)
DNA (1566bp) protein (522aa)
beta-fructosidase, family GH32 (EC:3.2.1.26)
Glycosyl hydrolase family 32 domain protein id=4124041 bin=GWC2_Clostridiales_40_7 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
Tax=CG_Arma_01
SCNpilot_cont_500_bf_scaffold_8640_3
unknown

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2418..2726
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8640_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2890..3912)
DNA (1023bp) protein (341aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Holliday junction DNA helicase subunit RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction DNA helicase RuvB n=1 Tax=Niabella aurantiaca RepID=UPI0003651079 rbh
SCNpilot_cont_500_bf_scaffold_8640_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3931..4347)
DNA (417bp) protein (139aa)
Ferric uptake regulator, Fur family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO42237.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
SCNpilot_cont_500_bf_scaffold_8640_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4455..5033)
DNA (579bp) protein (193aa)
Electron transport protein SCO1/SenC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCI9_NIAKG
electron transport protein SCO1/SenC; K07152
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:AEW02529.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8640_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5353..5742
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003708741
Uncharacterized protein {ECO:0000313|EMBL:KIC91003.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_8640_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5966..6691
DNA (726bp) protein (242aa)
xylose isomerase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003805E13
Xylose isomerase {ECO:0000313|EMBL:AKD55641.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
xylose isomerase
SCNpilot_cont_500_bf_scaffold_8640_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6799..7098)
DNA (300bp) protein (100aa)
RNP-1 like RNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG92_NIAKG
RNA-binding protein {ECO:0000313|EMBL:KIC96483.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RNP-1 like RNA-binding protein
SCNpilot_cont_500_bf_scaffold_8640_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7319..7975
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003763C39
Thioredoxin {ECO:0000313|EMBL:KIC96424.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
thioredoxin; K07396 putative protein-disulfide isomerase
SCNpilot_cont_500_bf_scaffold_8640_11
unknown

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8084..8542
DNA (459bp) protein (153aa)

This feature has no annotations

Displaying 11 items

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