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SCNpilot_cont_500_bf_scaffold_6460

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6460_1
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..161
DNA (159bp) protein (53aa)
class I and II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9]
aminotransferase class I/II n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034DB81A
Aminotransferase class I/II {ECO:0000313|EMBL:KIA99309.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
SCNpilot_cont_500_bf_scaffold_6460_2
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(204..776)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JB69_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59913.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_cont_500_bf_scaffold_6460_3
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(763..1128)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2JB00_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ59843.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6460_4
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1198..1497)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITV6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99199.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_cont_500_bf_scaffold_6460_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1720..2484
DNA (765bp) protein (255aa)
methyltransferase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B33BBC rbh
Methyltransferase {ECO:0000313|EMBL:AHF15010.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
methylase
SCNpilot_cont_500_bf_scaffold_6460_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2622..2951
DNA (330bp) protein (110aa)
Export-related chaperone CsaA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG21_CHIPD
chaperone CsaA; K06878 tRNA-binding protein
Export-related chaperone CsaA {ECO:0000313|EMBL:ACU58004.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_6460_7
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2958..4199)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C16EB rbh
Inner membrane transport protein yjjL {ECO:0000313|EMBL:CCH51115.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
Inner membrane transport protein yjjL rbh
SCNpilot_cont_500_bf_scaffold_6460_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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4335..4862
DNA (528bp) protein (176aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EDF67
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_500_bf_scaffold_6460_9

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4950..6176
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362E168 rbh
Tetracycline_Resistance_MFS_Efflux_Pump {ECO:0000313|EMBL:AIA14104.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Major facilitator superfamily (MFS) permease; K08151 MFS transporter, DHA1 family, tetracycline resistance protein rbh
Displaying 9 items

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