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SCNpilot_cont_500_bf_scaffold_6921

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6921_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..529)
DNA (528bp) protein (176aa)
catalase/peroxidase HPI (EC:1.11.1.6); K03782 catalase-peroxidase [EC:1.11.1.21]
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Catalase-peroxidase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTU5_PEDHD
SCNpilot_cont_500_bf_scaffold_6921_2
unknown

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comp(743..1240)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6921_3
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1511..2872)
DNA (1362bp) protein (454aa)
glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] rbh
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:ADZ79545.1}; EC=1.3.99.7 {ECO:0000313|EMBL:ADZ79545.1};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Glutaryl-CoA dehydrogenase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3T5_SPHS2 rbh
SCNpilot_cont_500_bf_scaffold_6921_4
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3397..5181
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003660D76
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Deltaproteobacteria_47_9_curated
SCNpilot_cont_500_bf_scaffold_6921_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5470..5859
DNA (390bp) protein (130aa)
oxidoreductase n=1 Tax=Segetibacter koreensis RepID=UPI0003753047
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACT92646.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying 5 items

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