ggKbase home page

SCNpilot_cont_500_bf_scaffold_6854_2

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 3231..4139

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBI2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 270.0
  • Bit_score: 265
  • Evalue 6.40e-68
RND transporter {ECO:0000313|EMBL:AKD58484.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 303.0
  • Bit_score: 272
  • Evalue 9.60e-70
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 305.0
  • Bit_score: 261
  • Evalue 2.90e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Spirosoma radiotolerans → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 909
ATGAAGAAATATATTAAATCGTTTACTCACGGTGTATCGCTGTTTTGTATCCTGTTTGTCTTTTCCTGCAAAACACCTTCGTCGCTTGTAAAAAATGAGCCGTTGAATTTACCGGGAACTTTTACCGGCGAAACAGATACTGTGAGTATAGGAGCAGAGCAGCGAAGGGTCTTTTTCAAAGACACGGTGCTCACCGGGCTGATAGACATTGCGCTGGCACAAAATATTGACCTGCAGAATACGCTTCAGAAGGTAAGTATAGCCCGTGCGGATATNNNNGATGTTTTTGCATCTGCGGGTATGGACAAATACGGTAAATACACCATGTCGGGAGTGGGAAATTTCGATACCAACCTGTCCTCCAACATTGACAAGGATCAGCAGGTGACCGATCCTGCGCAGGACTTTTTCCTCGGACTCAAAAGCCATTGGGAAATTGATCTGTGGGGCAAACTGAAATCAGAAAAAAAAGCTGCTTATGCAAGGGTGCTTGCTTCAGAAAAAGGAAGGCAATGGGTGATCACGCAACTGGTGGCAACAGTGGCATCTTATTATTATGAATTGCTGGCACTCGATAACAGGCTGGAGATCGTGCACCGCAATATTGCACTGCAGGAAAGAGCCGTGGAAGTAGTGAAAGCGCAGAAGGAAGCCGGACGCGCTACATCCCTTGCCGTACAGCAGTTTTCAGCGCAGCTTTTGCAAACACAGAGTCTCGAATATGAAACCCGTCTCAGCATTGTGAAGCTGGAGAATGAATTGAACGCCCTGCTGGGGCGATATGCGCAGACGCCTGTGCCGCGTGGAGAGACTATCAGGCAACAGCAATTAATAAGCCAGATGGAAGCGGGTGTGCCCTGCAACTGCTTACTCAAAGACCCGATATACAGCAGGCAGAGTGGGAGCTGA
PROTEIN sequence
Length: 303
MKKYIKSFTHGVSLFCILFVFSCKTPSSLVKNEPLNLPGTFTGETDTVSIGAEQRRVFFKDTVLTGLIDIALAQNIDLQNTLQKVSIARADXXDVFASAGMDKYGKYTMSGVGNFDTNLSSNIDKDQQVTDPAQDFFLGLKSHWEIDLWGKLKSEKKAAYARVLASEKGRQWVITQLVATVASYYYELLALDNRLEIVHRNIALQERAVEVVKAQKEAGRATSLAVQQFSAQLLQTQSLEYETRLSIVKLENELNALLGRYAQTPVPRGETIRQQQLISQMEAGVPCNCLLKDPIYSRQSGS*