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SCNpilot_cont_500_bf_scaffold_8499_10

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 8880..9584

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE60_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 249.0
  • Bit_score: 235
  • Evalue 7.20e-59
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 249.0
  • Bit_score: 235
  • Evalue 2.30e-59
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 248.0
  • Bit_score: 257
  • Evalue 1.90e-65

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 705
ATGACAGAATTTCGACCGGGTGGATTTCAGGTATTGCCCTTAGTAGTAAAAAACTTGCTTATTATTAACGGGCTGGCATTTTTAGCACAAAATGTTTTTGGCGGTAATGAAACATTTTCAATAGAGAATTTTTTCGCGTTGCATGATGTTCGCTCCATATACTTTAAGCCTCATCAGATAGTGAGCTATCTTTTTTTGCATGGAAGTTTTTTTCATTTGTTTTCCAATATGTTTGCTTTATGGATGTTCGGTAGTGTTTTGGAAAATTACTGGGGGGCTAAAAGGTTTTTGATCTTTTACATGTTATGCGGTATCGGAGCCGGGTTATTGCATCTCGGGGTGCTTTATTATGAAAATAATGCTGTGCTGGAAGCTGTCAAAGCATACCCTGCAGAAGCACAAAAGGAGCTTTTCCAAAATCCGAGATTTTTATTGAACACCGCTACGCTTGGCGCTTCCGGTTCTGTATTTGGCTGCCTTGCCGCGTTTGGATATTTATTCCCCAACAGTCTTATTTACCTGTATTTTTTCCTGCCAGTCAAAGCAAAATGGTTTGTAATATTCTATGCTGCCATGGAGCTGTTTGCCGGGGTCAGGAATTCTGCCGGTGATGAGGTGGCGCACTGGGCTCATCTTGGAGGAGCCCTGGTTGGATTTTTATTGGTATTCTACTGGAATAAAACCAACCGCAGAAAATTTTATTAG
PROTEIN sequence
Length: 235
MTEFRPGGFQVLPLVVKNLLIINGLAFLAQNVFGGNETFSIENFFALHDVRSIYFKPHQIVSYLFLHGSFFHLFSNMFALWMFGSVLENYWGAKRFLIFYMLCGIGAGLLHLGVLYYENNAVLEAVKAYPAEAQKELFQNPRFLLNTATLGASGSVFGCLAAFGYLFPNSLIYLYFFLPVKAKWFVIFYAAMELFAGVRNSAGDEVAHWAHLGGALVGFLLVFYWNKTNRRKFY*