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SCNpilot_cont_500_bf_scaffold_8499

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8499_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..844
DNA (843bp) protein (281aa)
AP endonuclease 2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBA0_NIAKG
AP endonuclease 2 domain protein
AP endonuclease 2 domain protein {ECO:0000313|EMBL:AEW02483.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8499_2
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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904..1335
DNA (432bp) protein (144aa)
Cytochrome C n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1D8_9FLAO
Cytochrome C {ECO:0000313|EMBL:EFK34153.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
Cytochrome c551/c552
SCNpilot_cont_500_bf_scaffold_8499_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1341..2069
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBA3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02486.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8499_4
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2379..3836
DNA (1458bp) protein (486aa)
M6 family peptidase (EC:3.4.-.-); K09607 immune inhibitor A [EC:3.4.24.-] rbh
Peptidase, M6 (Immune inhibitor A) family {ECO:0000313|EMBL:ABF86128.1}; EC=3.4.-.- {ECO:0000313|EMBL:ABF86128.1};; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
Peptidase, M6 (Immune inhibitor A) family n=2 Tax=Myxococcus xanthus RepID=Q1D7M1_MYXXD rbh
SCNpilot_cont_500_bf_scaffold_8499_5
unknown

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4012..4296
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8499_6
unknown

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4629..5225
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8499_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5316..6908)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCG2_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02502.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8499_8
unknown

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comp(7256..7351)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8499_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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7378..8799
DNA (1422bp) protein (474aa)
23S rRNA m(5)U-1939 methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] rbh
23S rRNA m(5)U-1939 methyltransferase {ECO:0000313|EMBL:AEW02296.1}; EC=2.1.1.- {ECO:0000313|EMBL:AEW02296.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
23S rRNA m(5)U-1939 methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7P1_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_8499_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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8880..9584
DNA (705bp) protein (235aa)
Rhomboid family protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE60_PEDSD
rhomboid family protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Displaying 10 items

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