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SCNpilot_cont_500_bf_scaffold_8977_11

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: 10815..11384

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIY3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 188.0
  • Bit_score: 248
  • Evalue 3.90e-63
Contig53, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76855.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 188.0
  • Bit_score: 249
  • Evalue 4.20e-63
outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 188.0
  • Bit_score: 248
  • Evalue 1.20e-63

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
GTGAGCGACGAGCAGGCGAAATACTTCGGCAAATTCAGCTACCCTACTTTTTCCGTGTTCAGTGTTTTTCAAAGCAGGGGCTCAGGTTTCCAGCCGGGCTATACTACCGACCAGTCTGCGTATACCCACGACTATTGGGAGGGCATTAAGCCGGTGCGCAGCAATTACCTGGTAGGCGTAGGCGTTAGCTGGAACCTCACTACACCCTTGCGGATACAGCAGCAGGTAACAGCACAAAAATTTATATCTGCAGGACTGAAGAATGAACTTGATCTGGTAAACCAGCGCCTGAATGAACAGCAGCGGCTTGCAGCGTCAAAAATGAAGAATGCTGTTGCTGCCTATGCGGAAGCGCCTGTTCAGGTAAAGGCAGCTTCGGACGCTTATTTGCAAAAGTCAGTGCTGTATAGGAATGGGCTTACCACTATCGTTGATGTTACCCAGTCGCTGTATGCGCTTACCCGTGCTGAAACAGACCGTGATATTGCATATAATAATGTGTGGCAGGCGCTTTTGCTGAAAGCGGCTGCTGCCGGAGATTTTAATTTGTTCATGACTGAGCTTCCATAG
PROTEIN sequence
Length: 190
VSDEQAKYFGKFSYPTFSVFSVFQSRGSGFQPGYTTDQSAYTHDYWEGIKPVRSNYLVGVGVSWNLTTPLRIQQQVTAQKFISAGLKNELDLVNQRLNEQQRLAASKMKNAVAAYAEAPVQVKAASDAYLQKSVLYRNGLTTIVDVTQSLYALTRAETDRDIAYNNVWQALLLKAAAAGDFNLFMTELP*