ggKbase home page

SCNpilot_cont_500_bf_scaffold_8977

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_8977_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..463
DNA (462bp) protein (154aa)
type I L-asparaginase; K01424 L-asparaginase [EC:3.5.1.1]
L-asparaginase, type I n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDC4_CHIPD
1-alkyl-2-acetylglycerophosphocholine esterase {ECO:0000313|EMBL:KIC95270.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_500_bf_scaffold_8977_2
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

694..2346
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000361A046 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ21886.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
membrane-bound dehydrogenase domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_8977_3
unknown

Not on your lists

2366..3286
DNA (921bp) protein (307aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8977_4
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3312..3740
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZXE6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EON78649.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
membrane-bound dehydrogenase domain-containing protein
SCNpilot_cont_500_bf_scaffold_8977_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3807..6893)
DNA (3087bp) protein (1029aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ43_NIAKG rbh
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:AEW01044.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_8977_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6904..7980)
DNA (1077bp) protein (359aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAI5_CHIPD rbh
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACU61189.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_8977_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7991..9262)
DNA (1272bp) protein (424aa)
Outer membrane efflux protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAI6_CHIPD rbh
outer membrane efflux protein rbh
Outer membrane efflux protein {ECO:0000313|EMBL:ACU61190.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_8977_8
unknown

Not on your lists

comp(9347..9718)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8977_9
unknown

Not on your lists

9766..9894
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_8977_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10010..10801
DNA (792bp) protein (264aa)
Outer membrane efflux protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C7H0_SPHS2
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADZ80591.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_500_bf_scaffold_8977_11
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10815..11384
DNA (570bp) protein (190aa)
Outer membrane efflux protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIY3_CHIPD
Contig53, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76855.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
outer membrane efflux protein
SCNpilot_cont_500_bf_scaffold_8977_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11452..12609
DNA (1158bp) protein (386aa)
Acriflavin resistance protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W549_DYAFD
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ACT92409.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Displaying 12 items

View Taxonomy