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SCNpilot_cont_500_bf_scaffold_29947_3

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 4 ASCG 10 / 38 MC: 1
Location: comp(684..914)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0J3_HALH1 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 72.0
  • Bit_score: 119
  • Evalue 1.90e-24
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 72.0
  • Bit_score: 119
  • Evalue 5.90e-25
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE48505.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 72.0
  • Bit_score: 119
  • Evalue 2.60e-24

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Taxonomy

Haliscomenobacter hydrossis → Haliscomenobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 231
ATGAAACAGTTTAAAGAATTGTTCTGGGAAGCATTGATGTCGGCCCTTGACGAACTTCCTGAAAATCAACGACAGGTTTTTATATGGAATGAACTGGAAGAAATGACGCTGCAGGAAATTGCCGATGCAACCAATGAAAAGCTGAAAACGATCATCAGCCGTAAAGGATATGCTGTAAAGCATTTACGAAAAAGGCTGGGAGATTTGTATGAAGAATTAAATACATTGTAG
PROTEIN sequence
Length: 77
MKQFKELFWEALMSALDELPENQRQVFIWNELEEMTLQEIADATNEKLKTIISRKGYAVKHLRKRLGDLYEELNTL*