ggKbase home page

SCNpilot_cont_500_bf_scaffold_3790

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3790_1
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(368..922)
DNA (555bp) protein (185aa)
Probable resolvase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MB56_PARUW
tnpR; resolvase
Probable resolvase {ECO:0000313|EMBL:CAF24193.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
SCNpilot_cont_500_bf_scaffold_3790_2
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1142..2731)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESV3_AMOA5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACE06305.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_500_bf_scaffold_3790_3
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3418..4575
DNA (1158bp) protein (386aa)
transposase Tn21 n=1 Tax=Curvibacter lanceolatus RepID=UPI000379B470
Tn3 transposase DDE domain protein {ECO:0000313|EMBL:KIN90475.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3790_4
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(4855..5187)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Ornithinibacillus scapharcae RepID=UPI000225B553
hypothetical protein
Tax=GWB2_Chloroflexi_54_36_curated
SCNpilot_cont_500_bf_scaffold_3790_5
unknown

Not on your lists

5351..5605
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3790_trna_1
unknown

Not on your lists

comp(5440..5525)
DNA (86bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_3790_6
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5664..6395
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=C3L4C7_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP20844.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_500_bf_scaffold_3790_7
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6382..7647
DNA (1266bp) protein (422aa)
Peptidase M23 n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUA9_AMOA5 rbh
peptidase M23 rbh
Peptidase M23 {ECO:0000313|EMBL:ACE05528.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
SCNpilot_cont_500_bf_scaffold_3790_8
Zootermopsis nevadensis, Zootermopsis, Isoptera, Neoptera, Arthropoda, Metazoa

Not on your lists

comp(7838..10570)
DNA (2733bp) protein (911aa)
Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2E5Y7_TRIVA
Involucrin {ECO:0000313|EMBL:KDR22313.1}; TaxID=136037 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Orthopteroidea; Dictyoptera; Isoptera; Termopsidae; Zootermopsis.;" source="Zootermopsis nevadensis (Dampwood termite).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3790_9
unknown

Not on your lists

comp(10690..11397)
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3790_10
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11700..11828)
DNA (129bp) protein (43aa)
peptidase U61 LD-carboxypeptidase A; K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
Peptidase U61 LD-carboxypeptidase A n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3EUB3_AMOA5
Peptidase U61 LD-carboxypeptidase A {ECO:0000313|EMBL:ACE05532.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
Displaying 11 items

View Taxonomy