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SCNpilot_cont_500_bf_scaffold_5519

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5519_1
unknown

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comp(2..100)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5519_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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452..1462
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003708395
BadF/BadG/BcrA/BcrD type ATPase
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:ACS59569.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_cont_500_bf_scaffold_5519_3
bacterium YEK0313, Bacteria

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comp(1443..2705)
DNA (1263bp) protein (421aa)
ornithine/diaminopimelate PLP-dependent decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
diaminopimelate decarboxylase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000348F563 rbh
L-glutamyl-[BtrI acyl-carrier protein] decarboxylase {ECO:0000313|EMBL:CEJ10624.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_5519_4
bacterium YEK0313, Bacteria

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comp(2702..4219)
DNA (1518bp) protein (506aa)
fadD; long-chain fatty acid-CoA ligase (EC:5.1.1.11) rbh
Long-chain-fatty-acid--CoA ligase LcfB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D406_9RHIZ rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEJ10625.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_5519_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4216..4470)
DNA (255bp) protein (85aa)
Acyl carrier protein n=2 Tax=Agrobacterium RepID=F0L5P1_AGRSH
acpP; acyl carrier protein
Uncharacterized protein {ECO:0000313|EMBL:AHK01525.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
SCNpilot_cont_500_bf_scaffold_5519_6
bacterium YEK0313, Bacteria

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comp(4467..5303)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q8U593_AGRT5
Uncharacterized protein {ECO:0000313|EMBL:CEJ10627.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5519_7
unknown

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comp(5429..5755)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5519_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5854..6621)
DNA (768bp) protein (256aa)
2SCG2.11, ftrE; Fe uptake system permease; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Fe uptake system permease n=1 Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9EX40_STRCO
Uncharacterized protein {ECO:0000313|EMBL:KKB08875.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_cont_500_bf_scaffold_5519_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6618..7631)
DNA (1014bp) protein (338aa)
Transport system permease n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y5V3_9RHOO
ABC transporter permease {ECO:0000313|EMBL:KKB10199.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter permease; K02015 iron complex transport system permease protein
SCNpilot_cont_500_bf_scaffold_5519_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7676..8512)
DNA (837bp) protein (279aa)
Fe3+-hydroxamate ABC transporter substrate-binding protein n=1 Tax=Paenibacillus elgii RepID=UPI000248DE95
Uncharacterized protein {ECO:0000313|EMBL:KKB10200.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_5519_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8570..9331)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAY4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08876.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_5519_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9717..10160)
DNA (444bp) protein (148aa)
NUDIX domain-containing protein 4 (EC:3.6.1.-)
NUDIX domain protein 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HNF3_ACHXA
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KGY24996.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
SCNpilot_cont_500_bf_scaffold_5519_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10157..11170)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003742884
Myristoyl transferase {ECO:0000313|EMBL:KKB06903.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
NMT1/THI5 like domain-containing protein; K15598 putative hydroxymethylpyrimidine transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_5519_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11167..11916)
DNA (750bp) protein (250aa)
aliphatic sulfonate ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI00037613F9
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB06902.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ABC transporter ATP-binding protein; K15600 putative hydroxymethylpyrimidine transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_5519_15
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11913..12710)
DNA (798bp) protein (266aa)
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00036140EC
Uncharacterized protein {ECO:0000313|EMBL:KKB06901.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
binding-protein-dependent transport systems inner membrane component; K15599 putative hydroxymethylpyrimidine transport system permease protein
SCNpilot_cont_500_bf_scaffold_5519_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12719..13327)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7G3_9RHIZ
HMP/thiamine-binding protein {ECO:0000313|EMBL:KKB06900.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
YKOF-like protein
SCNpilot_cont_500_bf_scaffold_5519_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13569..13967
DNA (399bp) protein (133aa)
Barnase inhibitor n=1 Tax=Nitratireductor indicus C115 RepID=K2NTS8_9RHIZ
Barnase inhibitor {ECO:0000313|EMBL:EKF42695.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
barnase inhibitor
Displaying 17 items

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