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SCNpilot_cont_500_bf_scaffold_14214

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_14214_1
unknown

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3..149
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_14214_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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158..763
DNA (606bp) protein (202aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
CMD domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSD8_RHITR
CMD domain-containing protein
SCNpilot_cont_500_bf_scaffold_14214_3
unknown

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comp(782..1033)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_14214_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1209..3602
DNA (2394bp) protein (798aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT6_PELHB rbh
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KKB84052.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCNpilot_cont_500_bf_scaffold_14214_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3667..3939)
DNA (273bp) protein (91aa)
UPF0335 protein MicloDRAFT_00038980 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTP5_9RHIZ
UPF0335 protein FF80_01263 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_14214_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4144..4635
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Z6_PELHB
Predicted integral membrane protein {ECO:0000313|EMBL:CDP50593.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_14214_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4770..6206
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Z7_PELHB
SCNpilot_cont_500_bf_scaffold_14214_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6311..6721
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037079F2
Uncharacterized protein {ECO:0000313|EMBL:KKB84343.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
Displaying 8 items

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