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SCNpilot_cont_500_bf_scaffold_7043

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7043_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..961
DNA (960bp) protein (320aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000381968C
Various polyols ABC transporter, ATP-binding compo nent {ECO:0000313|EMBL:CDP51493.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
sugar ABC transporter ATP-binding protein
SCNpilot_cont_500_bf_scaffold_7043_2
unknown

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comp(958..1197)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7043_3
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1457..5008)
DNA (3552bp) protein (1184aa)
Proline dehydrogenase (Proline oxidase) {ECO:0000313|EMBL:ESR26930.1}; EC=1.2.1.88 {ECO:0000313|EMBL:ESR26930.1};; EC=1.5.5.2 {ECO:0000313|EMBL:ESR26930.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003712AFB
SCNpilot_cont_500_bf_scaffold_7043_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5325..5786
DNA (462bp) protein (154aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
cytochrome C oxidase n=1 Tax=Kaistia granuli RepID=UPI000373B191
Peptidase S41 {ECO:0000313|EMBL:KFL27427.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_cont_500_bf_scaffold_7043_5
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5837..6895
DNA (1059bp) protein (353aa)
cytochrome C oxidase n=1 Tax=Kaistia granuli RepID=UPI000373B191
Peptidase S41 {ECO:0000313|EMBL:KKC31325.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
cbb3-type cytochrome c oxidase subunit I
SCNpilot_cont_500_bf_scaffold_7043_6
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6901..7632
DNA (732bp) protein (244aa)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTL8_9RHIZ
Peptidase S41 {ECO:0000313|EMBL:EXL02330.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II
SCNpilot_cont_500_bf_scaffold_7043_7
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7637..7810
DNA (174bp) protein (58aa)
Cbb3-type cytochrome oxidase component n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489843
Nitrogen fixation protein FixQ {ECO:0000313|EMBL:KEQ03038.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
cbb3-type cytochrome oxidase, subunit CcoQ
SCNpilot_cont_500_bf_scaffold_7043_8
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7801..8664
DNA (864bp) protein (288aa)
Cbb3-type cytochrome c oxidase subunit n=2 Tax=Oligotropha carboxidovorans RepID=B6JIK2_OLICO
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
ccoP2; cbb3-type cytochrome oxidase subunit CcoP; K00406 cytochrome c oxidase cbb3-type subunit III
SCNpilot_cont_500_bf_scaffold_7043_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8661..8879
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8A8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81704.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Displaying 9 items

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