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SCNpilot_cont_500_bf_scaffold_7560

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7560_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1275
DNA (1275bp) protein (425aa)
Monooxygenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K0G8_AGRVS
Monooxygenase {ECO:0000313|EMBL:KKC31069.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
monooxygenase
SCNpilot_cont_500_bf_scaffold_7560_2
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1272..1841
DNA (570bp) protein (190aa)
putative amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
amidohydrolase n=1 Tax=Rhizobium leguminosarum RepID=UPI000362F957
Amidohydrolase {ECO:0000313|EMBL:KKB82409.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
SCNpilot_cont_500_bf_scaffold_7560_3
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1844..2377
DNA (534bp) protein (178aa)
hippurate hydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CBK2_9RHIZ
Amidohydrolase {ECO:0000313|EMBL:KKB82409.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
SCNpilot_cont_500_bf_scaffold_7560_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2374..3063
DNA (690bp) protein (230aa)
Acetyltransferase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJU9_AGRRK
Acetyltransferase {ECO:0000313|EMBL:KGM32176.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
acetyltransferase
SCNpilot_cont_500_bf_scaffold_7560_5
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3335..5110
DNA (1776bp) protein (592aa)
amino acid ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]; K02029 polar amino acid transport system permease protein
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Phyllobacterium sp. YR531 RepID=J2V938_9RHIZ
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:EJN02382.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
SCNpilot_cont_500_bf_scaffold_7560_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5113..6144
DNA (1032bp) protein (344aa)
ABC transporter substrate-binding protein n=1 Tax=Ochrobactrum anthropi RepID=UPI00028959FC
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXL03362.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
amino acid ABC transporter; K02030 polar amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_7560_7
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6314..7249
DNA (936bp) protein (312aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Rhizobium sp. CF142 RepID=J2KWR6_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB82495.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
amino acid ABC transporter; K02030 polar amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_7560_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8187..8519
DNA (333bp) protein (111aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3B5C9_9RHIZ
COG1609: Transcriptional regulators {ECO:0000313|EMBL:CDP49919.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Transcriptional regulator
SCNpilot_cont_500_bf_scaffold_7560_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8574..10184
DNA (1611bp) protein (537aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQB5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDP49920.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7560_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10243..10635
DNA (393bp) protein (131aa)
Sugar ABC transporter substrate binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGA2_PELHB
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein {ECO:0000313|EMBL:CDP49921.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
sugar ABC transporter substrate binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_7560_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10619..11431
DNA (813bp) protein (271aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2KQ62_9RHIZ
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein {ECO:0000313|EMBL:CDP49921.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_7560_12
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11698..12669)
DNA (972bp) protein (324aa)
cation transporter n=1 Tax=Sinorhizobium medicae RepID=UPI0003671A1C rbh
cation diffusion facilitator family transporter rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEG04720.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
SCNpilot_cont_500_bf_scaffold_7560_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12666..12938)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D1CAC
Holliday junction DNA helicase RuvA {ECO:0000313|EMBL:ERF82640.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7560_14
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13064..13960
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0KVM2_RHILT
Uncharacterized protein {ECO:0000313|EMBL:KFC68824.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein; K07454 putative restriction endonuclease
SCNpilot_cont_500_bf_scaffold_7560_15
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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14065..15501
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003640963 rbh
glycoside hydrolase family protein rbh
Glycoside hydrolase family 38 {ECO:0000313|EMBL:ACU73884.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
Displaying 15 items

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