ggKbase home page

SCNpilot_cont_500_bf_scaffold_7615

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7615_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..540)
DNA (540bp) protein (180aa)
Putative efflux protein, MATE family n=1 Tax=Variovorax sp. CF313 RepID=J3CXM3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFL26195.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
mate efflux family protein
SCNpilot_cont_500_bf_scaffold_7615_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

781..1482
DNA (702bp) protein (234aa)
3-oxoacyl-ACP reductase n=1 Tax=Burkholderia thailandensis RepID=UPI00016A574C
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KGM32445.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
short chain dehydrogenase/reductase oxidoreductase
SCNpilot_cont_500_bf_scaffold_7615_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1562..2281
DNA (720bp) protein (240aa)
AzlC family protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JFB7_DESDE
Uncharacterized protein {ECO:0000313|EMBL:KKB86076.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
AzlC family protein
SCNpilot_cont_500_bf_scaffold_7615_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2271..2573
DNA (303bp) protein (101aa)
Branched-chain amino acid ABC transporter n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2M8Z8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKC34312.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
branched-chain amino acid transport
SCNpilot_cont_500_bf_scaffold_7615_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2633..3217
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F1F1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX36608.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7615_trna_1
unknown

Not on your lists

3275..3356
DNA (82bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_7615_6
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3661..4314
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037FD30C
Uncharacterized protein {ECO:0000313|EMBL:KKC31665.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7615_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4324..4986
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CF60_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKC31666.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7615_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5471..5974
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IJ49_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF86248.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_7615_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6052..6555
DNA (504bp) protein (168aa)
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFI9_PELHB
Periplasmic thiol:disulfide oxidoreductase DsbB, r equired for DsbA reoxidation {ECO:0000313|EMBL:CDP51786.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation
SCNpilot_cont_500_bf_scaffold_7615_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6587..7468)
DNA (882bp) protein (294aa)
Lipolytic protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Z5_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:KKB11665.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
lipolytic protein
SCNpilot_cont_500_bf_scaffold_7615_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7484..7870)
DNA (387bp) protein (129aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLV5_SIDLE
Uncharacterized protein {ECO:0000313|EMBL:KKB11623.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_500_bf_scaffold_7615_12
unknown

Not on your lists

comp(7830..7943)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7615_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7953..8300)
DNA (348bp) protein (116aa)
ArsR family transcriptional regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BXZ4_9RHIZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:KKB11666.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_7615_14
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8480..9037)
DNA (558bp) protein (186aa)
HNH endonuclease family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFI8_PELHB
MFS transporter {ECO:0000313|EMBL:KFL28391.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
HNH endonuclease family protein
SCNpilot_cont_500_bf_scaffold_7615_15
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9133..9720)
DNA (588bp) protein (196aa)
Esterase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFI7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB11118.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
phospholipase/carboxylesterase family protein; K06999 phospholipase/carboxylesterase
SCNpilot_cont_500_bf_scaffold_7615_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9720..10364)
DNA (645bp) protein (215aa)
alkA; DNA-3-methyladenine glycosidase II (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
DNA-3-methyladenine glycosidase II n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9J6_BORPD
DNA-3-methyladenine glycosidase {ECO:0000313|EMBL:KKB11117.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_500_bf_scaffold_7615_17
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10395..10865
DNA (471bp) protein (157aa)
glutamyl-Q-tRNA synthetase; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
Glutamyl-Q-tRNA synthetase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFI5_PELHB
Glutamyl-Q tRNA(Asp) ligase {ECO:0000313|EMBL:KKB11116.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Displaying 18 items

View Taxonomy